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Updated: Jun 5, 2026

An In Vitro Batch-culture Model to Estimate the Effects of Interventional Regimens on Human Fecal Microbiota
Published on: July 31, 2019
Stool Microbiota, Metabolites, and Fecal Incontinence in Women
Lily A Arya1, Purna C Kashyap2, Megan U Carnes3
1Obstetrics and Gynecology, Perelman School of Medicine of the University of Pennsylvania, Philadelphia, PA.
Fecal incontinence (FI) is not linked to butyrate or Clostridiales bacteria. Instead, specific stool lipids like glycerolipids and fatty acids may play a role, offering new therapeutic targets for FI.
Area of Science:
- Gastroenterology
- Microbiome Research
- Metabolomics
Background:
- Fecal incontinence (FI) can be influenced by gut motility and sensation.
- Specific stool metabolites and microbial taxa are hypothesized to contribute to FI pathogenesis.
Purpose of the Study:
- To investigate the association between fecal incontinence (FI) and levels of butyrate and Clostridiales taxa in stool.
- To explore novel stool metabolite signatures related to FI and its subtypes.
Main Methods:
- Compared stool metabolites and microbiota in 96 women with FI and 42 controls.
- Utilized 16S rRNA gene sequencing for microbiota characterization and multiomics factor analysis for metabolite profiling.
- Assessed FI severity and subtype using validated questionnaires and bowel diaries.
Main Results:
- No significant differences in butyrate levels or Clostridiales taxa were found between FI patients and controls.
- Multiomics analysis revealed glycerolipids associated with FI (FDR=0.08).
- Insensible FI showed associations with glycerolipids, fatty acids, phospholipids, and dipeptides (FDR=0.08-0.09).
Conclusions:
- Butyrate and Clostridiales are not significantly associated with fecal incontinence.
- Novel stool metabolite signatures, including lipids, are identified in FI patients.
- These findings suggest new biological pathways and potential therapeutic targets for managing FI.
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