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Pediatric Glucose-6-Phosphate Dehydrogenase Reference Intervals Derived from Archived Phenotype and Genotype Test
Kwaku Baryeh1, Kelly Doyle2,3
1Laboratory for Experimental Medicine, Eli Lilly and Company, Indianapolis, IN, United States.
Insights
Establishing pediatric reference intervals for Glucose-6-phosphate dehydrogenase (G6PD) activity is crucial for diagnosis. Indirect methods using real-world data accurately determined these G6PD reference intervals and thresholds, aligning well with genetic classifications.
Area of Science:
- Clinical Chemistry
- Pediatric Diagnostics
- Genetics
Background:
- Glucose-6-phosphate dehydrogenase (G6PD) deficiency is a common global enzymopathy.
- G6PD activity declines with age, necessitating age-specific reference intervals (RIs) for pediatric diagnosis.
- Establishing pediatric RIs is challenging due to difficulties in direct sample collection.
Purpose of the Study:
- To establish accurate, age-partitioned reference intervals (RIs) for G6PD activity in children.
- To develop percentage of normal activity thresholds (PNATs) for G6PD assessment in pediatric populations.
- To validate indirect RI methods using real-world data and genotype correlations.
Main Methods:
- Utilized a large dataset of G6PD activity results from pediatric patients (<18 years).
- Employed the refineR package with Box-Cox transformation to derive RIs and medians for PNATs.
- Validated RIs and PNATs by correlating with G6PD genotype data.
Main Results:
- Established age-partitioned RIs for G6PD activity across five pediatric age groups.
- Demonstrated strong agreement (96% for RIs, 93% for PNATs) between derived values and genotype classifications.
- The dataset comprised 32,576 G6PD activity results.
Conclusions:
- Indirectly derived pediatric reference intervals for G6PD activity are accurate.
- These RIs and PNATs align effectively with G6PD genotype classifications in children.
- The study validates the use of real-world, noncurated data for establishing pediatric diagnostic standards.
Background:
Glucose-6-phosphate dehydrogenase (G6PD) deficiency is the most prevalent global enzymopathy with risks of hemolytic anemia and hyperbilirubinemia. G6PD activity peaks at birth and decreases during the first year of life. Therefore, partitioned reference intervals (RI) are important for diagnosing G6PD deficiencies in pediatric patients. Given the paucity of pediatric RIs and difficulties in direct sample collection from healthy children, indirect RI methods were utilized to evaluate RIs for G6PD activity in this population. We established accurate RIs and percentage of normal activity thresholds (PNAT) for G6PD activity in children using refineR and genotype data.
Methods:
G6PD activity (U/g Hb) from patients <18 years old tested in our laboratory were used to derive RIs and PNATs. refineR with 1-parameter Box-Cox transformation was used to determine RIs and medians for PNATs. Bootstrapping was used to calculate confidence intervals for the estimated RIs. Retrospective analysis of G6PD activity results and correlating G6PD genotypes, were used to verify the estimated RIs and PNATs.
Results:
Age-partitioned 2.5th, 50th, and 97.5th percentiles (point estimate, U/g Hb) for children were established from a dataset of 32 576 results <8 days (16.4, 19.9, 24.1), 8-<31 days (13.6, 18.2, 23.9), 1-<7 months (11.5, 16.2, 21.5), 7-<13 months (10.3, 13.7, 17.9), and 1-<18 years (9.7, 12.9, 16.9). Alignment of RIs and PNATs with genotype classification (n = 105) showed 96% and 93% agreement, respectively, in unaffected, heterozygous, and deficient individuals across age groups.
Conclusions:
Indirect RIs for G6PD in children from a noncurated real-world dataset showed strong alignment with genotype classification.
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