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Identification of three phage lysozymes and their function in innate immunity of Mercenaria mercenaria
Qian Ren1, Guqin Ji1, Ying Huang2
1State Key Laboratory of Climate System Prediction and Risk Management, Nanjing University of Information Science and Technology, Nanjing, 210044, China; School of Marine Sciences, Nanjing University of Information Science and Technology, Nanjing, 210044, China.
Abstract:
Phage lysozyme, a protein traditionally associated with bacteriophages, has recently been identified in certain molluscs, which is thought to be acquired through horizontal gene transfer. However, the immune functions of phage lysozyme genes in Mercenaria mercenaria remain unclear. In this study, three phage lysozyme genes, designated as MmpLyso1, MmpLyso2, and MmpLyso3, were identified from M. mercenaria. MmpLyso1 encodes a 154-amino-acid protein, while MmpLyso2 and MmpLyso3 encode proteins of 171 and 225 amino acids, respectively. Genomic structure analysis showed that MmpLyso1 lacks introns and contains a single exon, whereas MmpLyso2 consists of two exons and one intron, and MmpLyso3 comprises three exons and two introns. Protein domain prediction revealed that MmpLyso1 and MmpLyso3 possess a conserved phage lysozyme domain, while MmpLyso2 contains a signal peptide and a 1LWK|A domain. Phylogenetic analysis classified MmpLyso1-3 into two distinct subgroups. Tissue distribution analysis demonstrated that these three genes are widely expressed in multiple tissues of M. mercenaria, with the highest expression levels detected in the marginal zone of the mantle. Expression pattern analysis indicated that the transcriptional levels of MmpLyso1-3 in the mantle were significantly upregulated to varying degrees after stimulation. Furthermore, in vivo knockdown of each phage lysozyme gene individually led to a significant decrease in the bacterial clearance ability of M. mercenaria. Collectively, these findings demonstrate that MmpLyso1-3 play crucial roles in the innate immune defense of M. mercenaria, thereby providing novel insights into the function and evolutionary origin of phage lysozyme genes in molluscs.
Insights
Three phage lysozyme genes (MmpLyso1-3) in Mercenaria mercenaria are crucial for innate immunity. These genes enhance bacterial clearance, offering insights into mollusc immune defense and gene evolution.
Area of Science:
- Marine Biology
- Immunology
- Genetics
Background:
- Phage lysozyme, typically found in bacteriophages, has been identified in molluscs, suggesting horizontal gene transfer.
- The immune functions of these acquired phage lysozyme genes in Mercenaria mercenaria were previously unknown.
Purpose of the Study:
- To identify and characterize phage lysozyme genes in Mercenaria mercenaria.
- To investigate the immune roles of these genes in the mollusc's innate defense system.
Main Methods:
- Gene identification and genomic structure analysis of MmpLyso1, MmpLyso2, and MmpLyso3.
- Protein domain prediction and phylogenetic analysis.
- Tissue distribution and expression pattern analysis post-stimulation.
- In vivo gene knockdown to assess bacterial clearance ability.
Main Results:
- Three phage lysozyme genes (MmpLyso1-3) were identified with varying genomic structures and protein domains.
- These genes are widely expressed in M. mercenaria tissues, particularly the mantle, and are upregulated upon stimulation.
- Knockdown of MmpLyso1-3 significantly impaired the bacteria clearance capacity of the clam.
Conclusions:
- MmpLyso1-3 are essential components of Mercenaria mercenaria's innate immune defense.
- These findings provide new perspectives on the functional roles and evolutionary origins of phage lysozyme genes in molluscs.
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