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Updated: Jun 6, 2026

RGB and Spectral Root Imaging for Plant Phenotyping and Physiological Research: Experimental Setup and Imaging Protocols
Published on: August 8, 2017
An introduction to the fundamentals of root systems research in cultivated plants
Dylan H Jones1, Akshay Babasaheb Tawale1, Hannah M Schneider1,2
1Department of Physiology and Cell Biology, Leibniz Institute of Plant Genetics & Crop Plant Research (IPK) OT Gatersleben, Corrensstr 3, Seeland 06466, Germany.
Background:
Although often overlooked due to being hidden below ground, plant roots are diverse in function and structure, and are fundamental to plant growth and future crop improvement due to their role in resource acquisition, anchorage, interaction with soil organisms and, in some cases, providing the crop harvestable product itself. Root systems are dynamic, expressing physiological variation between species, cultivars, environments and even within the continuum of a single root, at each level contributing uniquely to plant and ecosystem processes.
Scope:
Designed as an educational review, this article provides a structured and accessible overview of the complex biology of roots in cultivated plants. We establish a foundational framework by defining different types of root systems, root classes and specialized root types. Serving as a primer for students, educators and researchers expanding their expertise, we review how variation in root traits affects plant growth and performance under stress conditions, and briefly introduce how some of these traits are genetically regulated. Finally, we summarize specific root research areas that have shown recent promise, offering a roadmap for further study.
Conclusions:
Gaining a comprehensive grasp of root system fundamentals, integrating insights from root physiology, phenotyping and genetics, is a vital first step for engaging with advanced plant science. This foundational knowledge is paramount for developing sustainable agricultural practices, enhancing crop resilience and contributing to global food security in an era of environmental change.
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