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Updated: Jun 6, 2026

Evaluation of Photosynthetic Behaviors by Simultaneous Measurements of Leaf Reflectance and Chlorophyll Fluorescence Analyses
Published on: August 9, 2019
Hyperspectral estimation of leaf chlorophyll under small-sample conditions via spectral augmentation and weighted
Jiahui Xu1,2,3, Yalong Song1,2,3, Yuanyuan Liu1,2,3
1College of Mechanical and Electrical Engineering, Tarim University, Alar, China.
Introduction:
Under small-sample conditions, hyperspectral leaf chlorophyll estimation is affected by high-dimensional collinearity, measurement noise, and cross-source acquisition discrepancies. Existing studies often treat training-distribution expansion and model-error complementarity separately. This study proposed a physically constrained composite spectral augmentation-weighted ensemble framework for reproducible small-sample chlorophyll estimation.
Methods:
Using 1,113 valid spectrum-label pairs from the leaf subset of the GreenHySpectra dataset in the 400-1000 nm range, spectra and chlorophyll reference values were matched by sample identifiers and divided into training and validation sets. Low-magnitude Gaussian noise and smooth wavelength warping were applied only to the training set. XGBoost, partial least squares regression, and ridge regression were optimized with Optuna using a CMA-ES sampler, and ensemble weights were calibrated by Bayesian optimization. An independent external set of 90 tomato leaf samples was used to evaluate transferability.
Results:
Composite augmentation improved model stability and reduced validation error relative to the non-augmented baseline. The weighted ensemble model achieved the best internal performance, with R² = 0.6392 and RMSE = 8.8883. On the external samples, the model achieved R² = 0.498 and RMSE = 9.801.
Discussion:
The proposed workflow integrates physically plausible augmentation, heterogeneous learner complementarity, and independent external validation. The external results indicate partial cross-source transferability while highlighting distributional and measurement-chain discrepancies that still limit absolute generalization.
