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Updated: Jun 6, 2026

Multiscale Sampling of a Heterogeneous Water/Metal Catalyst Interface using Density Functional Theory and Force-Field Molecular Dynamics
Published on: April 12, 2019
HiMac: High-Throughput Initialization of Multidentate Adsorption Configurations for Geometry Relaxation and
Yinkai Wu1, Xiyuan Yu1, Cheng Chen1
1State Key Laboratory of Green Chemical Engineering and Industrial Catalysis, Center for Computational Chemistry and Research Institute of Industrial Catalysis, East China University of Science and Technology, Shanghai, 200237, People's Republic of China.
Abstract:
High-throughput computation is essential for the rational design of heterogeneous catalysts, and the quality of the initial adsorption configurations directly determines the efficiency and success rate of subsequent geometry optimization. Existing heuristic methods are constrained by rigid-body approximations, making it difficult for them to handle complex multidentate adsorption, and the low-precision force field correction schemes on which they rely lack generality. To address this issue, this work proposes a general algorithm, High-Throughput Initialization of Multidentate Adsorption Configurations (HiMac). The algorithm reformulates configuration generation as a multiobjective optimization problem. It employs forward kinematics to model molecular flexibility and combines it with a loss function based on parent molecule similarity, thereby unifying site selection with pose adjustment. A statistical learning module is further integrated to prioritize the exploration of chemically favorable sites and reduce the computational cost. Experiments show that HiMac generates high-quality initial configurations for geometry relaxation and transition-state searches, is applicable to arbitrary adsorbate-surface systems, and provides a general and efficient method to accelerate the rational design of heterogeneous catalysts.
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