An Ensemble Learning Framework Utilizing Fusion Molecular Fingerprints for Pollutant Removal Prediction in Advanced
Meng-Jie Luo1, Zhi-Heng Guo1, Zhixiang She1
1State Key Laboratory of Advanced Environmental Technology, Department of Environmental Science and Engineering, University of Science and Technology of China, Hefei, Anhui 230026, China.
Environmental Science & Technology
|June 9, 2026
Summary
This study introduces a new fingerprint-fusion ensemble learning framework for predicting pollutant degradation kinetics in water treatment. The advanced model accurately forecasts reactivity, improving upon traditional methods for cleaner water solutions.
Area of Science:
- Environmental Chemistry
- Computational Chemistry
- Water Treatment Technologies
Background:
- Accurate prediction of pollutant degradation kinetics is crucial for effective water treatment process design and optimization.
- Conventional quantitative structure-activity relationship (QSAR) models face limitations due to incomplete chemical representations from single-molecular fingerprints.
Purpose of the Study:
- To develop an advanced fingerprint-fusion ensemble learning framework for predicting pollutant reactivity in water treatment.
- To enhance the accuracy of pollutant degradation kinetics prediction by integrating diverse molecular features and environmental variables.
Main Methods:
- Developed a fingerprint-fusion ensemble learning framework that decouples prediction tasks using specialized base learners.
- Employed complementary molecular fingerprints to capture compositional, topological, and conformational features of pollutants.
- Integrated base learner predictions with environmental variables using a meta-learner.
Main Results:
- Achieved high predictive accuracy with test R² values of 0.96 for ozonation and 0.80 for zero-valent iron (ZVI) reduction.
- Outperformed the best single-fingerprint baseline model by over 5% in predictive accuracy.
- Identified key compositional, topological, and conformational drivers of pollutant reactivity through multidimensional interpretation analysis.
Conclusions:
- Fingerprint-fusion ensemble learning is a highly effective strategy for predicting and interpreting pollutant reactivity in advanced water treatments.
- The developed framework offers superior predictive performance compared to conventional QSAR models.
- An interactive web platform was created to provide accessible tools for reactivity prediction and mechanistic exploration in water treatment.

