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Updated: Jun 10, 2026

Microbial Communities in Nature and Laboratory - Interview
Published on: May 28, 2007
mGem: Tapping into the language of symbiosis to advance human microbiome research
Gina R Lewin1,2, Lily Khadempour3
1Center for Global Health and Diseases, Department of Pathology, Case Western Reserve University School of Medicine, Cleveland, Ohio, USA.
Abstract:
In human microbiome research, the term "commensal" is often used to describe organisms that benefit their hosts. In ecology, in host-microbe symbiosis, a commensal organism has no impact on its host, whereas a mutualist organism benefits its host. While others have recognized this discrepancy in terminology use, old habits are hard to break, and the human microbiome community has continued in this vein. This is our call to action for the human microbiome community to use more precise terminology that appropriately reflects the impact that these microbes have on their hosts. We should use the terms "commensal" and "mutualist" when we know the effect on the host, and "symbiont" when we do not. By using the same terminology as ecologists, we will be able to make use of, and contribute to the vast research in the field of symbiosis.
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