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High-resolution Single Particle Analysis from Electron Cryo-microscopy Images Using SPHIRE
Published on: May 16, 2017
Cryo-EM reveals a right-handed double-helix dimer architecture of PCDH15
Xiaoping Liang1, Roshan Pathak2, Xufeng Qiu1
1The Solomon H. Snyder Department of Neuroscience, Johns Hopkins University School of Medicine, Baltimore, MD 21205.
Abstract:
Tip links connect the stereocilia of mechanosensory hair cells in the inner ear and transmit force onto mechanotransduction (MET) channels. Tip links consist of protocadherin 15 (PCDH15) and cadherin 23, which assemble into an extracellular filament approximately 150 nm in length. Rare freeze-etched electron microscopy (EM) images have suggested that tip links could be right-handed double helices in vivo, but direct structural evidence has been lacking. Using cryo-EM we determined the structure of a large part of the extracellular PCDH15 domain. Two PCDH15 molecules form a parallel cis dimer stabilized by several dimerization interfaces, including two strand crossovers and two parallel contacts, yielding a right-handed double helix. Functional studies show that mutations in PCDH15 dimerization-domains impair MET. Our results establish the molecular foundation for how PCDH15 forms a right-handed double helix to enable mechanical sensing.
Insights
Protocadherin 15 (PCDH15) forms a right-handed double helix in the inner ear's tip links. This structure is crucial for mechanical sensing by hair cells and force transmission to mechanotransduction channels.
Area of Science:
- Molecular biology
- Structural biology
- Auditory neuroscience
Background:
- Tip links connect stereocilia in inner ear hair cells, transmitting force to mechanotransduction (MET) channels.
- Tip links are composed of protocadherin 15 (PCDH15) and cadherin 23, forming a ~150 nm filament.
- Previous electron microscopy suggested tip links might be right-handed double helices, but direct structural evidence was absent.
Purpose of the Study:
- To determine the structure of the extracellular PCDH15 domain.
- To provide direct structural evidence for the in vivo conformation of tip links.
- To elucidate the molecular basis of PCDH15's role in mechanical sensing.
Main Methods:
- Cryo-electron microscopy (cryo-EM) to determine the structure of the extracellular PCDH15 domain.
- Analysis of dimerization interfaces within the PCDH15 structure.
- Functional studies assessing the impact of PCDH15 mutations on MET.
Main Results:
- Two PCDH15 molecules form a parallel cis dimer, creating a right-handed double helix.
- Dimerization is stabilized by strand crossovers and parallel contacts.
- Mutations in PCDH15 dimerization domains were found to impair mechanotransduction (MET).
Conclusions:
- PCDH15 forms a right-handed double helix, establishing the molecular foundation for tip link structure.
- This helical structure is essential for the mechanical sensing function of hair cells.
- The findings clarify how PCDH15 contributes to force transmission in the auditory system.
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