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Related Experiment Videos

Wave-aware mortality prediction in COVID-19: a multi-stage feature selection and explainable machine-learning

Elaheh Fereidouni1, Shadi Shafaghi2, Hamidreza Jamaati3

  • 1Department of Biostatistics, School of Public Health, Iran University of Medical Sciences, Tehran, Iran.

BMC Medical Informatics and Decision Making
|June 10, 2026
PubMed
Summary

Related Concept Videos

Steps in Outbreak Investigation01:18

Steps in Outbreak Investigation

In the ever-evolving field of public health, statistical analysis serves as a cornerstone for understanding and managing disease outbreaks. By leveraging various statistical tools, health professionals can predict potential outbreaks, analyze ongoing situations, and devise effective responses to mitigate impact. For that to happen, there are a few possible stages of the analysis:

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This summary is machine-generated.

COVID-19 mortality prediction models degrade over time due to evolving epidemic conditions. A wave-aware machine learning approach is crucial for maintaining clinical utility by accounting for temporal drift in risk factors.

Area of Science:

  • Machine learning applications in public health
  • Epidemiology and disease modeling
  • Computational biology and bioinformatics

Background:

  • Hospitalized COVID-19 patient mortality varied significantly across epidemic waves due to shifting variants, population immunity, and healthcare system pressures.
  • Concerns exist regarding the reliability of early-phase COVID-19 prediction models in later, more heterogeneous epidemic contexts.

Purpose of the Study:

  • To develop a machine learning framework that is aware of epidemic waves.
  • To differentiate between stable physiological predictors of mortality and context-dependent predictors whose importance changes across waves.

Main Methods:

  • Analysis of 732,654 adult hospitalizations from Iran's national COVID-19 registry across Waves 2-5 and the post-Wave-5 period.
  • Independent preprocessing, feature selection, and model training within each wave to preserve temporal structure.
Keywords:
COVID-19Concept driftDeep neural networkElastic netExplainable AIFeature selectionIn-hospital mortalityMachine learningRandom forestSHAPTemporal modeling

Related Experiment Videos

  • A three-stage feature selection approach (Elastic Net, Random Forest, Variance Inflation Factor) to identify stable and time-varying predictors.
  • Main Results:

    • A core set of physiological predictors (age, hypoxemia, chronic comorbidities) remained consistent across waves.
    • Nonlinear models, particularly Random Forest, outperformed Logistic Regression in within-wave testing (AUC up to 0.94, F1 up to 0.68).
    • Early-wave models showed significant performance degradation when applied to later waves, with F1 scores collapsing due to miscalibration.

    Conclusions:

    • COVID-19 mortality is influenced by a stable physiological core and dynamic, wave-specific factors.
    • Static prediction models are susceptible to temporal drift, leading to degraded clinical utility.
    • Drift-aware approaches, such as recalibration or adaptive thresholding, are essential for maintaining the clinical utility of prediction models in evolving infectious disease environments.