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Updated: Jun 12, 2026

Scalable Isolation and Purification of Extracellular Vesicles from Escherichia coli and Other Bacteria
Published on: October 13, 2021
Bacterial extracellular vesicles promote membrane repair and tolerance to polymyxin B
Julia Bos1, Yasmina Abou Haydar1,2, Olena Mayboroda3,4
1Institut Pasteur, Université Paris Cité, CNRS UMR3525, Unité Plasticité du Génome Bactérien, 75015 Paris, France.
Abstract:
Bacterial extracellular vesicles (EVs) are nanosized lipid structures released under stress, yet their interactions with antibiotics remain poorly understood. We tracked real-time interactions between Escherichia coli, EVs, and fluorescent polymyxin B (Pmb) using single-cell imaging and cytometric approaches. EVs rapidly sequester Pmb, facilitating its removal from bacterial envelopes, and act as plugs by adhering to or fusing with damaged sites. Pmb triggers early Cpx/σE- and Rcs-dependent stress responses, linked to a ∼25% reduction in cell surface area, a ∼50-fold increase in vesiculation, and remodeling of membrane properties. After an adaptive lag phase, sustained EV release supports detoxification and envelope repair, enabling growth recovery and transient tolerance to Pmb. Together, these findings reveal previously unrecognized functions of EVs in membrane repair and tolerance to membrane-active antibiotics.
Insights
Bacterial extracellular vesicles (EVs) rapidly sequester polymyxin B, aiding in its removal and repairing cell damage. This process helps bacteria survive antibiotic stress and recover growth.
Area of Science:
- Microbiology
- Cell Biology
- Biochemistry
Background:
- Bacterial extracellular vesicles (EVs) are released under stress but their role in antibiotic interaction is unclear.
- Understanding EV-antibiotic interactions is crucial for developing new therapeutic strategies.
Purpose of the Study:
- To investigate the real-time interactions between *Escherichia coli*, EVs, and the antibiotic polymyxin B (Pmb).
- To elucidate the functions of EVs in bacterial response to membrane-active antibiotics.
Main Methods:
- Single-cell imaging and cytometric approaches were used to track interactions.
- Fluorescently labeled polymyxin B was employed to monitor antibiotic localization and sequestration.
Main Results:
- EVs rapidly sequestered Pmb, removing it from bacterial envelopes and plugging damaged sites.
- Pmb induced stress responses, reducing cell surface area and increasing vesiculation (EV release).
- Sustained EV release facilitated detoxification, envelope repair, and transient antibiotic tolerance.
Conclusions:
- Bacterial EVs play a significant role in sequestering and detoxifying membrane-active antibiotics like Pmb.
- EVs contribute to bacterial envelope repair and mediate tolerance to antibiotic stress.
- These findings reveal novel functions of EVs in bacterial defense mechanisms.
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