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Published on: December 6, 2024
Augmenting large language models with clinical knowledge graph for personalized perioperative fluid therapy question
Jie Song1, Jinhua Feng1,2,3, Yuxin Zhang1
1Joint Laboratory of Artificial Intelligence for Critical Care Medicine, Department of Critical Care Medicine and Institutes for Systems Genetics, Frontiers Science Center for Disease-related Molecular Network, West China Hospital, Sichuan University, Chengdu, China.
This study introduces GraphRAG, a novel approach for personalized perioperative fluid therapy using a clinical knowledge graph. GraphRAG significantly improves the accuracy of large language models in answering complex patient-specific questions, enhancing clinical decision support.
Area of Science:
- Medical Informatics
- Artificial Intelligence in Medicine
- Clinical Decision Support Systems
Background:
- Personalized perioperative fluid therapy is crucial for minimizing postoperative complications.
- Large Language Models (LLMs) face challenges in healthcare, including hallucinations and lack of domain-specific knowledge, hindering their use in fluid therapy.
- Retrieval-Augmented Generation (RAG) and Knowledge Graphs (KGs) offer potential solutions for improving LLM accuracy and reliability.
Purpose of the Study:
- To develop and evaluate a domain-adapted retrieval strategy for personalized perioperative fluid therapy question answering.
- To construct a Personalized Fluid Therapy Knowledge Graph (PFTKG) and adapt a graph-based RAG strategy (GraphRAG).
- To compare the performance of GraphRAG against traditional RAG (DocRAG) and prompting strategies (Vanilla, CoT, RoT) across multiple LLMs.
Main Methods:
- Construction of a Personalized Fluid Therapy Knowledge Graph (PFTKG) with 6,490 entities and 15,687 relationships.
- Adaptation of GraphRAG, a graph-based RAG strategy utilizing community detection and recursive summarization for finding-level retrieval.
- Evaluation using knowledge-based (300 questions) and retrospective case-based (262 questions from 206 patients) datasets, assessing accuracy, honesty, and error composition across GPT-4o, Claude Opus 4, and Gemini 2.5 Pro.
Main Results:
- GraphRAG achieved the highest average accuracy on the knowledge-based question set (96.89% multiple-choice, 66.44% open-ended).
- On the retrospective case-based set, GraphRAG demonstrated superior performance (71.12% accuracy) compared to DocRAG (62.47%) and prompting strategies (52-54%).
- GraphRAG reduced context-irrelevant errors and improved acknowledgment of uncertainty when a "Don't know" option was included.
Conclusions:
- GraphRAG is an effective domain-adapted retrieval strategy for personalized perioperative fluid therapy question answering.
- Integrating a clinical knowledge graph with hierarchical summarization and finding-level retrieval enhances answer accuracy and promotes conservative responses under uncertainty.
- The findings support the potential of GraphRAG for future clinically integrated studies in perioperative care.
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