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Published on: February 23, 2018
Scalable and Efficient Deep Learning-Based Pipeline for Mitotic Detection and Analysis in Pathology Images
Xuan Qi1, Dominic LaBella2, Thomas Sanford3
1Laboratory of Cancer Biology and Genetics, Center for Cancer Research, National Cancer Institute, National Institutes of Health, Bethesda, MD 20892, USA.
Abstract:
Background: Accurate and efficient analysis of mitotic figures in whole-slide images (WSIs) is essential for tumor grading and prognosis. Methods: In this work, we present a three-stage pipeline for WSI-scale mitosis analysis that balances accuracy with clinical throughput: (1) a YOLOv11-based detector to propose mitosis candidates; (2) an ultra-lightweight classifier to refine detections and suppress false positives; and (3) a downstream classifier to distinguish atypical from normal mitoses for deeper biological insight. Results: In benchmark datasets, the two-stage detector improves F1 over detection-only baselines, while the atypical/normal module achieves strong accuracy, demonstrating cross-domain generalization. We further perform a proof-of-concept survival analysis on early-stage (I-II) cases from the TCGA-BRCA cohort, suggesting that mitosis-derived features may provide modest incremental prognostic information beyond the clinical baseline and nuclei features. Conclusions: Overall, the method delivers accurate detection, robust atypical mitosis classification, and high efficiency, processing gigapixel WSIs in minutes on a single GPU, positioning it for large-scale translational studies and future clinical workflow validation.

