A Foundation Model for Capturing Complexity of Menstrual Health Data
Robin Linzmayer1,2, Chao Pang2, Iñigo Urteaga3,4
1Department of Computer Science, Columbia University, New York, NY, 10027, USA.
Npj Women'S Health
|June 12, 2026
Summary
Generative artificial intelligence (AI) can now model complex menstrual cycle data from millions of users. This AI approach generates realistic synthetic health data, advancing women's health research and forecasting.
Area of Science:
- Computational health research
- Women's health
- Artificial intelligence applications
Background:
- Menstrual cycle data is complex, variable, and often limited, hindering computational health research.
- Generative artificial intelligence (AI) presents a novel opportunity for modeling large-scale menstrual health datasets.
Purpose of the Study:
- To introduce and evaluate a generative foundation model for menstrual health data.
- To assess the model's ability to generate physiologically plausible synthetic cycles and realistic tracking behaviors.
- To examine the model's learned representations for temporal and symptomatic patterns and evaluate privacy risks.
Main Methods:
- Trained a generative foundation model on self-tracked menstrual data from over 1.2 million app users.
- Assessed synthetic data fidelity, realism of tracking behaviors, and privacy implications.
- Evaluated learned representations on downstream forecasting tasks.
Main Results:
- The generative AI model produced high-fidelity synthetic menstrual data closely mirroring real-world user data.
- No evidence of data leakage was found, indicating strong privacy preservation.
- Learned representations significantly outperformed baseline methods in forecasting tasks.
Conclusions:
- Generative AI holds significant potential for advancing menstrual health forecasting and enabling privacy-sensitive data sharing.
- This approach can facilitate scientific inquiry and improve women's health research.
- The developed model offers a robust tool for generating realistic synthetic menstrual data.
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