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Published on: January 16, 2019
ClusterGraph: a new tool for visualisation and compression of multidimensional data
Paweł Dłotko1,2, Davide Gurnari2, Mathis Hallier2,3
1Center of Trustworthy AI for Life Sciences - International Research Agendas Programme, Warsaw University, 00-927, Warsaw, Poland.
This study introduces ClusterGraph, a novel data structure that enhances clustering algorithms by revealing the global organization of high-dimensional data. ClusterGraph aids in visualizing and analyzing complex datasets more effectively.
Area of Science:
- Data Science
- Applied Mathematics
- Computer Science
Background:
- High-dimensional data analysis is crucial across applied sciences.
- Dimensionality reduction techniques often fail to capture global data structure.
- Clustering methods group data but lack global organizational insights.
Purpose of the Study:
- To introduce a novel data structure, ClusterGraph, to represent the global organization of clusters.
- To provide a method that complements existing clustering algorithms.
- To enable better understanding and visualization of high-dimensional data structures.
Main Methods:
- Leveraging concepts from Topological Data Analysis.
- Developing the ClusterGraph data structure to layer on clustering algorithm outputs.
- Defining measures to assess the quality and utility of the ClusterGraph representation.
Main Results:
- ClusterGraph successfully captures the global layout of clusters derived from any clustering algorithm.
- The proposed measures effectively evaluate the quality of the ClusterGraph representation.
- ClusterGraph facilitates synergistic use with exploratory data analysis techniques.
Conclusions:
- ClusterGraph offers a valuable addition to clustering, providing global data organization insights.
- The structure can be simplified and visualized for enhanced exploratory data analysis.
- This approach improves the understanding of complex, high-dimensional datasets.
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