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Related Concept Videos

Genome-wide Association Studies-GWAS01:11

Genome-wide Association Studies-GWAS

Genome-wide association studies or GWAS are used to identify whether common SNPs are associated with certain diseases. Suppose specific SNPs are more frequently observed in individuals with a particular disease than those without the disease. In that case, those SNPs are said to be associated with the disease. Chi-square analysis is performed to check the probability of the allele likely to be associated with the disease.
GWAS does not require the identification of the target gene involved in...
Next-generation Sequencing03:00

Next-generation Sequencing

The first human genome sequencing project cost $2.7 billion and was declared complete in 2003, after 15 years of international cooperation and collaboration between several research teams and funding agencies. Today, with the advent of next-generation sequencing technologies, the cost and time of sequencing a human genome have dropped over 100 fold.
Next-Generation Sequencing Methods
Although all next-generation methods use different technologies, they all share a set of standard features.

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Personalized Peptide Arrays for Detection of HLA Alloantibodies in Organ Transplantation
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Genomic Confirmation of HLA-C*01:155, by Next Generation Sequencing.

Jarret Merschman1, Rachel Barnes1, Justin Kreuter1

  • 1Department of Laboratory Medicine and Pathology, Mayo Clinic, Rochester, Minnesota, USA.

HLA
|June 14, 2026
PubMed
Summary

The human leukocyte antigen (HLA) C*01:155 allele is identified by a specific genetic alteration. This single nucleotide substitution occurs in codon 225 within exon 4 of the HLA-C gene.

Keywords:
HLA‐C*01:155allele confirmationhistocompatibilityimmunogeneticsnext generation sequencing

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Area of Science:

  • Immunogenetics
  • Molecular Biology
  • Human Leukocyte Antigen (HLA) System

Background:

  • The Human Leukocyte Antigen (HLA) complex plays a critical role in immune response and transplantation.
  • Specific HLA alleles are associated with diverse immune functions and disease susceptibilities.
  • Detailed characterization of novel HLA alleles is essential for understanding immune diversity.

Purpose of the Study:

  • To describe the molecular characteristics of the newly identified HLA-C*01:155 allele.
  • To provide precise genetic information for this specific HLA allele.

Main Methods:

  • Sequence analysis of the HLA-C gene.
  • Identification of nucleotide variations.
  • Comparison with known HLA allele sequences.

Main Results:

  • The HLA-C*01:155 allele is defined by a single nucleotide substitution.
  • This substitution is located at codon 225 in exon 4 of the HLA-C gene.

Conclusions:

  • The genetic signature of HLA-C*01:155 has been precisely identified.
  • This characterization contributes to the growing database of HLA allele variations.
  • Understanding such variations is crucial for HLA typing and immunological studies.