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Published on: October 25, 2024
Integrated Circular RNAs Analysis Across the Hypothalamic-Pituitary-Ovarian Axis Identifies Regulatory Modules
Linhong Xie1, Zhonglong Zhao1, Yonghong Zhang1
1College of Animal Science, Jilin University, Changchun, China.
Circular RNAs (circRNAs) regulate gene expression in geese. This study reveals their role in the hypothalamic-pituitary-ovarian axis, linking them to reproductive traits and breed differences through a ceRNA network.
Area of Science:
- Genomics
- Molecular Biology
- Reproductive Biology
Background:
- Circular RNAs (circRNAs) are crucial post-transcriptional regulators with largely unknown functions in avian reproductive systems.
- The hypothalamic-pituitary-ovarian (HPO) axis controls reproduction, but the role of circRNAs within it is poorly understood.
Purpose of the Study:
- To investigate the association of circRNAs with breed differentiation and reproductive traits in flying geese.
- To explore the function of circRNAs in the avian HPO axis by constructing cross-tissue expression profiles.
Main Methods:
- Whole-transcriptome sequencing of the HPO axis (hypothalamus, ovary, pituitary) in Zi and Xianghai flying geese.
- Identification and analysis of differentially expressed circRNAs (DE-circRNAs) and their host genes.
- Construction of a cross-tissue circRNA-mediated regulation of gene expression (ceRNA) network integrating circRNA, miRNA, and mRNA expression data.
Main Results:
- Identified hundreds of DE-circRNAs across the hypothalamus, ovary, and pituitary.
- Host genes of DE-circRNAs were enriched in key reproduction-related signaling pathways (e.g., cAMP, PI3K-Akt, GnRH).
- Constructed a cross-tissue ceRNA network, revealing potential regulatory modules involving circRNAs, miRNAs, and mRNAs, with key hubs like CYP19A1, FSHR, BMP15, and ESR1.
Conclusions:
- CircRNAs are implicated in a cross-tissue neuroendocrine-ovarian regulatory network in geese.
- These circRNAs may play a significant role in reproductive trait variation through ceRNA interactions.
- Provides novel molecular insights into avian reproductive biology and potential targets for trait improvement.
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Cis-regulatory Sequences
Cis-regulatory Sequences
Regulation of Expression Occurs at Multiple Steps
Transcription results in the generation of precursor (pre-mRNA) that consists of both exons and introns, which needs further processing before being translated to a...
Regulation of Expression Occurs at Multiple Steps
Transcription results in the generation of precursor (pre-mRNA) that consists of both exons and introns, which needs further processing before being translated to a...

