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Bayesian Structured Mediation analysis with Unobserved confounders
Yuliang Xu1, Shu Yang2, Jian Kang3
1Department of Statistics, University of Chicago, Chicago, IL 60637, United States.
Biometrics
|June 17, 2026
Summary
We developed a Bayesian method (BASMU) to reduce bias in causal mediation analysis, especially for brain imaging data. BASMU improves the accuracy of estimating direct and indirect effects, outperforming existing methods.
Area of Science:
- Neuroimaging
- Biostatistics
- Causal Inference
Background:
- Causal mediation analysis is crucial for understanding complex relationships.
- High-dimensional mediators, like brain imaging data, present challenges due to unobserved confounders.
- Spatial structures in mediators can be influenced by unobserved subject-specific confounding.
Purpose of the Study:
- To develop a robust method for causal mediation analysis with high-dimensional, spatially structured mediators.
- To address the impact of unobserved confounders in mediation analysis.
- To improve the accuracy of estimating Natural Indirect Effects (NIE) and Natural Direct Effects (NDE).
Main Methods:
- Developed the BAyesian Structured Mediation analysis with Unobserved confounders (BASMU) framework.
- Incorporated spatial latent subject-specific confounding effects into the outcome model.
- Proposed a two-stage estimation algorithm for bias mitigation.
- Established model identifiability conditions for BASMU.
Main Results:
- Theoretical analysis confirmed reduced asymptotic bias in NIE and NDE estimation.
- Extensive simulations demonstrated BASMU's substantial bias reduction across scenarios.
- Application to fMRI data identified 2-4 times more significant mediation voxels compared to existing methods.
- NIE increased by 41% and NDE decreased by 26% in the fMRI analysis.
Conclusions:
- BASMU effectively reduces bias caused by unobserved confounders in mediation analysis of structured, high-dimensional data.
- The framework enhances the identification of significant mediation effects in neuroimaging studies.
- BASMU offers a more accurate approach to estimating direct and indirect effects in complex biological systems.
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