Related Experiment Video
Updated: Jun 20, 2026

Visualization of Metabolites Identified in the Spatial Metabolome of Traditional Chinese Medicine Using DESI-MSI
Published on: December 16, 2022
DESI-MSI applications for direct (spatial) biomolecular analysis of South African natural medicinal products
Kabelo N Mohlamonyane1, Efficient N Ncube1,2, Marco Giampà3
1Department of Pharmaceutical Sciences, Faculty of Science, Tshwane University of Technology, Pretoria, South Africa.
Introduction:
In pharmacognosy, conventional analytical methods provide important chemical information on metabolite identities and relative quantities. However, in situ analysis and the mapping of the spatial distribution of metabolites remain underexplored. Mass spectrometry (MS) imaging techniques, specifically desorption electrospray ionization-MS imaging (DESI-MSI), enables the in situ analysis and visualization of the spatial distribution of metabolites in different plant tissues. This study aimed to demonstrate the application of DESI-MSI for the in situ analysis and visualization of the spatial distribution of metabolites in selected South African medicinal plants and natural products.
Methods:
DESI-MSI was used to putatively assign antimicrobial compounds from propolis via HPTLC-bioautography assay and to visualize the spatial distribution of various compounds, including coumarins in the roots of Pelargonium reniforme and Pelargonium sidoides, pyrrolizidine alkaloids in the stems of Lobostemon fruticosus, and aspalathin in the leaves of Aspalathus linearis.
Results:
The antimicrobial compounds of South African propolis were putatively assigned as chrysin, pinocembrin, galangin, pinobanksin and its derivatives. The technique enabled the differentiation between P. sidoides and P. reniforme based on the location and spatial distribution of umckalin, dihydroxy-dimethoxycoumarin and isofraxidin sulphite in the root samples. Furthermore, the spatial distribution of pyrrolizidine alkaloids (PAs) was mapped in the pith, epidermis, and cortex regions of L. fruticosus stems, while aspalathin was mapped in the margins and tips (upper and lower epidermal regions) of A. linearis leaf samples.
Conclusion:
This study demonstrates the feasibility of using DESI-MSI for in situ chemical profiling of commercially important South African medicinal plants and natural products, supporting their identification and differentiation for quality control.
Related Concept Videos
MALDI-TOF Mass Spectrometry
Rapid Identification of Pathogens
Matrix-Assisted Laser Desorption Ionization (MALDI)
