Related Experiment Video
Updated: Jun 21, 2026

Comparative Proteomic Analysis of Whole Kidney, Medulla, and Cortical Tubules in Diabetic Pathogenesis of Kidney Injury in Mice
Published on: May 2, 2025
Key module genes in proximal tubular cells drive microenvironmental chronic inflammation and fibrosis in diabetic
Wenjing Zhou1, Zhaogui Chen1, Guanghui Ying1
1Department of Nephrology, Beilun People's Hospital, Ningbo, 315826, Zhejiang, China.
Abstract:
Diabetic kidney disease (DKD) is one of the most severe microvascular complications of diabetes, with proximal tubular (PT) epithelial cells playing a pivotal role in its progression, yet the underlying dynamic molecular mechanisms remain unclear. In this study, single-cell transcriptomic dataset GSE183276 and bulk RNA-seq dataset GSE30122 were integrated to systematically analyze the heterogeneity and functional alterations of PT epithelial cells in DKD. PT epithelial cells were classified into three subpopulations: PT-Homeostatic, PT-Transitional and PT-Stressed. In DKD, the PT-Homeostatic subpopulation decreased markedly, whereas PT-Transitional and PT-Stressed subpopulations increased significantly. Functional enrichment analyses revealed that PT-Homeostatic cells mainly participated in amino acid and fatty acid metabolism; PT-Transitional cells were enriched in wound repair, Wnt signaling and oxidative stress response; PT-Stressed cells were associated with fibroblast proliferation, anti-apoptosis and chemotaxis regulation. Pseudotime analysis indicated that PTECs gradually shift from a homeostatic to a stressed phenotype during DKD progression. Eight core downregulated genes were further screened, among which HPGD and G6PC were specifically highly expressed in PT-Homeostatic cells and significantly downregulated in DKD. In vitro experiments demonstrated that high glucose repressed transcription factor RXRA expression to further reduce G6PC transcription. RXRA overexpression restored G6PC levels, inhibited pro-inflammatory and fibrotic markers, and upregulated E-cadherin, while G6PC knockdown reversed these protective effects. Collectively, this study uncovered the dynamic phenotypic transition of PTECs in DKD and identified the RXRA-G6PC axis as a potential therapeutic target.
Insights
Diabetic kidney disease involves dynamic changes in kidney proximal tubular cells. The RXRA-G6PC pathway offers a potential therapeutic target for this diabetes complication.
Area of Science:
- Nephrology
- Molecular Biology
- Genomics
Background:
- Diabetic kidney disease (DKD) is a severe diabetes complication.
- Proximal tubular (PT) epithelial cells are crucial in DKD progression.
- The dynamic molecular mechanisms of PT cells in DKD are not fully understood.
Purpose of the Study:
- To analyze the heterogeneity and functional changes of PT epithelial cells in DKD.
- To identify key molecular players and pathways involved in DKD pathogenesis.
- To uncover potential therapeutic targets for DKD.
Main Methods:
- Integration of single-cell and bulk RNA sequencing datasets (GSE183276, GSE30122).
- Classification of PT epithelial cell subpopulations (PT-Homeostatic, PT-Transitional, PT-Stressed).
- Functional enrichment analysis, pseudotime analysis, and in vitro experiments.
Main Results:
- PT epithelial cells in DKD transition from homeostatic to stressed phenotypes.
- PT-Homeostatic cells decrease, while PT-Transitional and PT-Stressed cells increase in DKD.
- The RXRA-G6PC axis was identified as a key regulator, with its downregulation contributing to DKD progression.
Conclusions:
- DKD involves a dynamic phenotypic shift in proximal tubular epithelial cells.
- The RXRA-G6PC axis plays a critical role in regulating PT cell function and DKD pathogenesis.
- Targeting the RXRA-G6PC axis presents a promising therapeutic strategy for diabetic kidney disease.
Related Concept Videos
Diabetic Nephropathy
Type II Diabetes I: Introduction
Type I Diabetes II: Pathophysiology