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Detection of Homologous Recombination Intermediates via Proximity Ligation and Quantitative PCR in Saccharomyces cerevisiae
Published on: September 11, 2022
Break-induced replication forms long mutable single-strand DNA during meiosis.
Jerzy M Twarowski1,2, Juraj Kramara1,3, Gabriel J Seuferer4,5
1Department of Biology, University of Iowa, Iowa City, IA, USA.
Nature Communications
|June 20, 2026
Summary
Meiosis generates long single-stranded DNA (ssDNA) tracts, leading to mutation clusters. This highlights meiosis
Area of Science:
- Genetics
- Molecular Biology
- Cell Biology
Background:
- Meiosis involves homologous recombination (HR) for genetic shuffling and halving of genomic content.
- HR during meiosis may be mutagenic, with single-stranded DNA (ssDNA) from double-strand breaks (DSBs) proposed as a mutagenic source.
Purpose of the Study:
- To investigate the mutagenic potential of ssDNA formed during meiosis.
- To identify the mechanisms responsible for ssDNA accumulation and mutagenesis during meiosis.
Main Methods:
- Expression of human APOBEC3A (A3A) in meiotic yeast cells to detect and map ssDNA.
- Analysis of mutation clusters to quantify ssDNA extent and identify associated genetic elements.
- Investigating the role of Spo11-induced DSBs, break-induced replication, and hyper-resection in ssDNA formation.
Main Results:
- Meiotic cells accumulate long ssDNA tracts, forming A3A-mutation clusters with up to 134 mutations over >25 kb.
- Formation of these mutation clusters requires Spo11-induced DSBs.
- Break-induced replication and hyper-resection of DSBs are key mechanisms for generating long meiotic ssDNA.
- ssDNA accumulation occurs in promoters and tRNA genes, indicating additional mutagenesis sources.
Conclusions:
- Meiosis possesses significant mutagenic potential, driven by the formation of extensive ssDNA.
- Understanding these ssDNA-driven mutagenic mechanisms is crucial for insights into evolution and congenital diseases.
- Spo11-induced DSBs, coupled with specific replication and resection pathways, underlie meiotic ssDNA accumulation and mutagenesis.
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