Related Experiment Video
Updated: Jun 23, 2026

Integrated Field Lysimetry and Porewater Sampling for Evaluation of Chemical Mobility in Soils and Established Vegetation
Published on: July 4, 2014
Molybdate Causes Target and Nontarget Inhibitory Effects on Microbial Arsenic Methylation in Paddy Soil
Bao-Yun Yang1,2, Chuan Chen1, Shuxin Li3
1Jiangsu Key Laboratory for Organic Waste Utilization, Jiangsu Collaborative Innovation Center for Solid Organic Waste Resource Utilization, College of Resources and Environmental Sciences, Nanjing Agricultural University, Nanjing 210095, China.
Abstract:
Microbial arsenic (As) methylation is enhanced in flooded paddy soils, producing mainly dimethylarsenic (DMA), which can cause rice straighthead disease and large yield losses. Sulfate-reducing bacteria (SRB) have been implicated as primary As methylators, largely based on experiments employing molybdate as a selective inhibitor of SRB. However, the specificity of molybdate inhibition on SRB- and non-SRB-mediated As methylation remains inadequately evaluated. In this study, we showed that molybdate addition at 10 mmol kg-1 suppressed DMA production in flooded paddy soil by 41%, concomitant with decreased transcription of genes encoding dissimilatory sulfite reductase (by 78%) and arsenite S-adenosylmethionine methyltransferase (arsM, by 28%). Metatranscriptomic analysis showed that molybdate additions significantly suppressed the expression of 12 and 31 arsMs hosted by SRB and non-SRB, respectively. To decipher the effects of molybdate on As methylation, we performed pure culture experiments with representative SRB and non-SRB fermentative bacteria isolated from paddy soils. Molybdate specifically inhibited the growth of SRB and completely suppressed its As methylation. Molybdate also caused partial inhibition of As methylation by fermentative bacteria without affecting their growth. Integrated transcriptomic and targeted metabolomic analyses revealed that molybdate suppressed the As(III)-induced transcription of arsM and trx [encoding thioredoxin (Trx) required as a reductant for As methylation] and the biosynthesis of methyl donor S-adenosylmethionine (SAM), contributing to the partial inhibition of As methylation in non-SRB. These findings indicate that, although molybdate inhibits SRB growth specifically and the associated As methylation, it can also cause nontarget effects on As methylation mediated by fermentative bacteria, which should be taken into account when interpreting microbial contributions to As methylation in flooded paddy soils.
Insights
Molybdate inhibits microbial arsenic methylation in paddy soils, but its effects extend beyond sulfate-reducing bacteria. This impacts our understanding of arsenic cycling and rice disease. Further research is needed to account for these non-target effects.
Area of Science:
- Environmental Microbiology
- Biogeochemistry
- Soil Science
Background:
- Microbial arsenic methylation in flooded paddy soils produces dimethylarsinic acid (DMA), a key factor in rice straighthead disease and yield loss.
- Sulfate-reducing bacteria (SRB) are traditionally considered primary arsenic methylators, often studied using molybdate as a specific inhibitor.
Purpose of the Study:
- To evaluate the specificity of molybdate's inhibition on arsenic methylation by SRB and non-SRB.
- To understand the molecular mechanisms underlying molybdate's effects on arsenic methylation in different bacterial groups.
Main Methods:
- Addition of molybdate to flooded paddy soil and analysis of DMA production and gene expression.
- Metatranscriptomic analysis to assess the impact of molybdate on arsenic methyltransferase (arsM) genes.
- Pure culture experiments with SRB and non-SRB fermentative bacteria, coupled with transcriptomic and metabolomic analyses.
Main Results:
- Molybdate addition significantly suppressed DMA production and the transcription of key arsenic methylation genes in soil.
- Molybdate specifically inhibited SRB growth and arsenic methylation, while partially inhibiting methylation in fermentative bacteria without affecting their growth.
- Molybdate affected the transcription of arsM and thioredoxin (trx) genes and the biosynthesis of S-adenosylmethionine (SAM) in non-SRB.
Conclusions:
- While molybdate effectively inhibits SRB-mediated arsenic methylation, it also exerts non-target effects on arsenic methylation by fermentative bacteria.
- These findings necessitate a re-evaluation of molybdate's utility in solely targeting SRB for arsenic methylation studies.
- Understanding these complex interactions is crucial for accurately assessing microbial contributions to arsenic cycling in paddy soils.
Related Concept Videos
Microbial Bioremediation of Uranium
Acid Mine Drainage
Microbe-Plant Interactions
Microbial Bioremediation of Pesticides
Microbial Leaching
Inhibitors of Bacterial Protein Synthesis

