Related Experiment Video
Updated: Jun 24, 2026

Analysis of Human T Cell Activity in an Allogeneic Co-Culture Setting of Pre-Treated Tumor Cells
Published on: March 7, 2025
Cancer-Intrinsic Protein Neddylation Modulates the Intratumoral Immune Landscape to Constrain Immune Checkpoint
Irineos Papakyriacou1,2, Yonglin Lu1,2, Malin Jarvius3,4
1Department of Immunology, Genetics and Pathology, Rudbeck Laboratory, Uppsala University, Uppsala, Sweden.
Abstract:
The cancer-intrinsic network controlling the response to immune checkpoint blockade therapy remains elusive. Using a published single-cell RNA sequencing (scRNA-seq) dataset from patients with breast cancer, we found that pretherapy mRNA expression of NEDD8, which encodes the regulatory protein essential for neddylation, in cancer cells was negatively associated with T-cell expansion upon pembrolizumab treatment. Genetic ablation of protein neddylation in murine tumors induced a curative response to PD-1 or PD-L1 blockade in mice. Combined analysis of neddylation-deficient murine tumors using scRNA-seq and high-resolution spatial transcriptomics revealed distinct spatial immune co-localization and immune cell signatures. In a high-content phenotypic screen of known compounds, protein neddylation was required for the induction of phenotypic changes by lipid inhibitors and ferroptosis inducers in human breast cancer cells. In accordance, these compounds enhanced the efficacy of PD-1 blockade and protected mice from tumor rechallenge. Altogether, we delineate the unknown functions of protein neddylation on antitumor immunity and provide therapeutic options that can enhance immunotherapy.
Insights
Protein neddylation in cancer cells hinders immune response to checkpoint blockade. Inhibiting neddylation or using specific compounds enhances anti-tumor immunity and improves immunotherapy outcomes.
Area of Science:
- Oncology
- Immunology
- Molecular Biology
Background:
- The precise mechanisms governing response to immune checkpoint blockade (ICB) therapy are not fully understood.
- Identifying intrinsic cancer networks that influence ICB efficacy is crucial for improving treatment outcomes.
Purpose of the Study:
- To investigate the role of protein neddylation in regulating anti-tumor immunity and response to ICB therapy.
- To explore potential therapeutic strategies targeting protein neddylation to enhance immunotherapy.
Main Methods:
- Analysis of single-cell RNA sequencing (scRNA-seq) data from breast cancer patients.
- Genetic ablation of protein neddylation in murine tumor models.
- scRNA-seq and spatial transcriptomics of neddylation-deficient tumors.
- High-content phenotypic screening of compounds affecting protein neddylation.
Main Results:
- Pre-therapy NEDD8 mRNA expression in cancer cells negatively correlated with T-cell expansion during pembrolizumab treatment.
- Genetic elimination of protein neddylation in mouse tumors led to curative responses to PD-1/PD-L1 blockade.
- Neddylation deficiency altered spatial immune cell distribution and signatures.
- Lipid inhibitors and ferroptosis inducers required protein neddylation for phenotypic changes in cancer cells and enhanced PD-1 blockade efficacy.
Conclusions:
- Protein neddylation plays a significant role in suppressing anti-tumor immunity.
- Targeting protein neddylation presents a promising therapeutic avenue to enhance the effectiveness of immune checkpoint blockade therapy.
- Compounds modulating neddylation can improve immunotherapy outcomes and protect against tumor recurrence.
Related Concept Videos
Tumor Immunotherapy
The Intrinsic Apoptotic Pathway
Targeted Cancer Therapies
There are several types of targeted therapies against specific...
Inhibition of Cdk Activity
Adaptive Mechanisms in Cancer Cells
Some of the advantages that cancer cells have on normal cells include - enhanced ability to divide without terminally differentiating, induce new blood vessel formation,...
Adaptive Mechanisms in Cancer Cells
Some of the advantages that cancer cells have on normal cells include - enhanced ability to divide without terminally differentiating, induce new blood vessel formation,...

