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Updated: Jun 24, 2026

Quantitative 3D In Silico Modeling (q3DISM) of Cerebral Amyloid-beta Phagocytosis in Rodent Models of Alzheimer's Disease
Published on: December 26, 2016
Study on diagnostic genes and immune microenvironment disorder in comorbid atherosclerosis and Alzheimer disease
Pengyun Ni1, Bingbing Zhao2, Hao Xv3
1Department of Science and Education, Baoji Traditional Chinese Medicine Hospital, Baoji, China.
Abstract:
Atherosclerosis (AS) and Alzheimer disease (AD) are globally prevalent chronic diseases with challenges of difficult early diagnosis and a lack of effective combined therapies. This study explored their shared molecular mechanisms, potential diagnostic biomarkers, and immune microenvironment disorders. Using AS dataset GSE100927 and AD dataset GSE97760, key differentially expressed genes (key DEGs) were identified via bioinformatics (differential expression analysis, protein-protein interaction network, machine learning). A risk prediction model was built and validated with receiver operating characteristic/area under the curve. Immune infiltration was compared between patient and control groups; miRNA-transcription factor-mRNA and key DEGs-chemical networks were predicted, and key DEGs-AS/AD causal relationships verified by Mendelian randomization. Venn analysis found 89 common DEGs (enriched in lipid metabolism, Wnt pathway, etc). Four key DEGs (early growth response 2 [EGR2], leukocyte-specific transcript 1 [LST1], membrane-spanning 4-domains subfamily A member 7 [MS4A7], and 2'-5'-oligoadenylate synthetase like [OASL]) were confirmed. The model had high accuracy (C-index = 0.982, area under the curve > 0.9). Mendelian randomization showed EGR2 was an AS risk/AD protective factor; LST1 an AS risk factor; MS4A7 an AD risk factor; no clear OASL-AD causality. EGR2, LST1, MS4A7, and OASL are novel diagnostic biomarkers and potential therapeutic targets for comorbid AS and AD.
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