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Ultrasensitive Detection of Porcine Epidemic Diarrhea Virus Infections Using Multivalent DNA Nanostructure-Enabled

Saurabh Umrao1,2,3,4,5, Akhila Naru6, Dhanush Gandavadi1,2,3

  • 1Department of Bioengineering, University of Illinois at Urbana-Champaign, Urbana, Illinois, USA.

Advanced Healthcare Materials
|June 23, 2026
PubMed
Summary

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A new DNA nanostructure lateral flow assay (LFA) enables rapid, ultrasensitive detection of porcine epidemic diarrhea virus (PEDV) on farms. This field-deployable diagnostic tool offers high accuracy for livestock disease surveillance and food security.

Area of Science:

  • Nanotechnology
  • Molecular Diagnostics
  • Veterinary Medicine

Background:

  • Early detection of livestock viral pathogens is crucial for disease control and food security.
  • Current diagnostics often require centralized labs and have long turnaround times, hindering on-farm application.
  • Porcine epidemic diarrhea virus (PEDV) poses a significant threat to swine health and the pork industry.

Purpose of the Study:

  • To develop a rapid, ultrasensitive, and field-deployable diagnostic assay for PEDV detection on farms.
  • To leverage DNA nanostructures and aptamers for enhanced diagnostic performance.
  • To validate the assay's accuracy, sensitivity, and specificity using clinical samples.

Main Methods:

  • Development of a DNA nanostructure-enabled lateral flow assay (LFA) presenting multivalent aptamers for PEDV detection.
Keywords:
DNA nanostructuresaptamer‐based diagnosticslateral flow assay (LFA)multivalent bindingporcine epidemic diarrhea virus (PEDV)pre‐clinical PEDV testing

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  • Utilized net-shaped DNA nanostructures for increased binding avidity.
  • Tested the assay on pig oral fluid and clinical samples from swine farms.
  • Main Results:

    • The DNA-nanostructure LFA achieved a limit of detection (LOD) of ~1.33 ng/mL for recombinant PEDV nucleocapsid protein and ~278 viral copies/test in oral fluid.
    • Results were obtained within 10 minutes without nucleic acid extraction or amplification.
    • Clinical sample validation (n=102) showed 97.06% accuracy, 96.92% sensitivity, and 97.30% specificity, with no cross-reactivity to other swine viruses.

    Conclusions:

    • The DNA-nanostructure LFA is a robust, field-deployable platform for rapid and ultrasensitive PEDV detection.
    • This technology significantly improves upon existing diagnostic limitations for on-farm disease surveillance.
    • The modular DNA-Net platform is adaptable for detecting other veterinary and zoonotic pathogens, supporting One Health initiatives.