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Updated: Jun 25, 2026

Analyzing Melts and Fluids from Ab Initio Molecular Dynamics Simulations with the UMD Package
Published on: September 17, 2021
Efficient Nonadiabatic Molecular Dynamics with Machine Learning Hamiltonian Interpolation
Yifan Wu1, Bipeng Wang1, Mohit Chaudhary2
1Department of Chemistry, University of Southern California, Los Angeles, California 90089, United States.
Abstract:
Nonadiabatic (NA) molecular dynamics (MD) is the method of choice for modeling far-from-equilibrium, excited state processes in molecules and materials. Machine learning (ML) can streamline all NAMD components, enabling quantum dynamics simulations of thousand-atom systems over nanoseconds. By comparing three qualitatively different ML models to interpolate the NA Hamiltonian and testing them on a metal halide perovskite, we demonstrate that bidirectional long-short-term-memory (BiLSTM) gives the best performance, since it is efficient for smaller, sequence-dependent data sets. Transformer also provides an accurate representation, although the amount of data is not sufficiently large to take full advantage of transformer capabilities. Kernel ridge regression (KRR) is simple and inexpensive, achieving rapid and robust NA Hamiltonian interpolation, although it requires smaller steps. Even with sparse training data, the models can closely replicate ab initio results while achieving 2 orders of magnitude computational savings. The reported advances allow one to accelerate the discovery and optimization of energy and optoelectronic materials.
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