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Published on: August 20, 2019
SATB2 dysregulation generates a novel circular RNA and drives KRAS-like transcriptional reprogramming and
Rebekah Eleazer1,2, Smitha George2, Luke J Shoemaker2
1Department of Molecular and Cellular Biochemistry, University of Kentucky, Lexington, KY, 40536, USA.
Background:
Even though epigenetic factors contribute to oncogenesis, most human cancer models still assume that disease originates from driver DNA mutations. Thus, it is still unclear if non-genetic mechanisms are sufficient to trigger malignant transformation. Special AT-rich binding protein 2 (SATB2) is a chromatin organizer that brings distal DNA elements into close proximity, thus remodeling chromatin structures to reprogram cell-specific and/or developmentally sensitive gene networks.
Methods:
Here, we chronically exposed human bronchial lung epithelial cells to ≤ 2 µM inorganic arsenic, and then used biochemical, molecular, and phenotypic assays to understand how changes in SATB2 expression and chromatin structure relate to oncogenic transformation.
Results:
We discovered that SATB2 generates a co-expressed circ3915 RNA that can be translated into a peptide that co-localizes with SATB2 in and around the nuclear membrane. Ectopic SATB2 or circ3915 expression rearranged global chromatin accessibility, generated KRAS- and NFE2L2-like oncogenic gene expression patterns, and induced oncogenic phenotypes and KRAS-like transcriptional programs in lung epithelial cells without iAs exposure or engineered driver mutations. SATB2 and circ3915 transcripts persisted through the epithelial-to-mesenchymal transition and were co-regulated in human LUAD and LUSC tumors and adjacent normal tissue.
Conclusions:
This study shows that transcriptional programs associated with oncogenic pathways can be activated in differentiated mammalian cells without predisposing mutations in oncogenes or epigenetic regulators.
Insights
Epigenetic factors, specifically Special AT-rich binding protein 2 (SATB2) and its associated circ3915 RNA, can drive oncogenic transformation in lung cells without DNA mutations, revealing new cancer mechanisms.
Area of Science:
- * Molecular biology and epigenetics research.
- * Cancer biology and oncogenesis.
- * Cellular transformation mechanisms.
Background:
- * Current cancer models primarily focus on driver DNA mutations, overlooking the role of epigenetic factors in oncogenesis.
- * The sufficiency of non-genetic mechanisms in initiating malignant transformation remains largely unelucidated.
- * Special AT-rich binding protein 2 (SATB2) functions as a chromatin organizer, capable of reprogramming gene networks.
Purpose of the Study:
- * To investigate the role of SATB2 expression and chromatin remodeling in oncogenic transformation of human bronchial lung epithelial cells.
- * To determine if epigenetic changes, independent of DNA mutations, can trigger cancer development.
Main Methods:
- * Chronic exposure of human bronchial lung epithelial cells to inorganic arsenic (iAs).
- * Utilized biochemical, molecular, and phenotypic assays to analyze SATB2 expression and chromatin structure.
- * Investigated the functional consequences of SATB2 and circ3915 RNA expression on cellular transformation.
Main Results:
- * SATB2 co-expresses with circ3915 RNA, which translates to a peptide localizing with SATB2.
- * Ectopic expression of SATB2 or circ3915 rearranged chromatin accessibility and induced oncogenic gene expression patterns (KRAS- and NFE2L2-like).
- * Induced oncogenic phenotypes and KRAS-like transcriptional programs in lung cells without iAs or driver mutations; SATB2 and circ3915 were co-regulated in human lung tumors.
Conclusions:
- * Transcriptional programs linked to oncogenic pathways can be activated in differentiated cells without predisposing mutations.
- * Epigenetic modifications mediated by SATB2 and circ3915 are sufficient to initiate oncogenic transformation.
- * Highlights the critical role of epigenetic mechanisms in cancer development, independent of genetic mutations.
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