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Updated: Jun 26, 2026

Isolation of Culturable Yeasts and Molds from Soils to Investigate Fungal Population Structure
Published on: May 27, 2022
Cultivable Fungi in Amazonian Black-, White-, and Clear-Water Rivers
Vanessa da Silva Bindá1, Juan Diego Ribeiro de Almeida2, Adriana Dos Santos Arévalo1
1Postgraduate Program in Biotechnology and Natural Resources of the Amazon, Amazonas State University (UEA), Manaus 69050-020, Brazil.
Abstract:
Cultivable fungi are important components of freshwater ecosystems, yet their diversity in Amazonian aquatic environments remains poorly explored. This study evaluated cultivable fungal communities associated with water, sediment, and submerged wood in the Negro, Solimões, and Tapajós Rivers, representing the major black-, white-, and clear-water systems of the Amazon basin, respectively. Samples were collected along 25 m transects, fungi were isolated on potato dextrose agar, grouped into morphotypes, and identified morphologically. Diversity was assessed using richness, Shannon, Simpson, Pielou, and Sørensen indices. Overall, 130 isolates and 75 morphotypes were recorded, with a predominance of morphotypes assigned to filamentous Ascomycota and widespread occurrence of Aspergillus and Penicillium. Solid substrates yielded greater fungal abundance and richness than water samples. Submerged wood from the Negro River showed the highest overall cultivable fungal abundance, whereas the Tapajós River showed the highest diversity in water and sediment and the highest richness in both substrates. The Solimões River showed stronger dominance by a limited number of morphotypes, particularly in submerged wood. Sørensen similarity values indicated low compositional overlap among rivers, especially for submerged wood communities, suggesting apparent differentiation among river-associated cultivable fungal assemblages. Together, these exploratory results suggest that substrate type, hydrochemical differences, and potential temporal effects may be associated with the structure of cultivable fungal communities in Amazonian rivers.
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