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Updated: Jun 26, 2026

Antibiotic Dereplication Using the Antibiotic Resistance Platform
Published on: October 17, 2019
Antibacterial drug discovery: challenges and preclinical promises from synthetic small molecules
Guilherme F S Fernandes1,2, Seong-Heun Kim3, Jean L Dos Santos4
1Chemical Biology Science Technology Platform, The Francis Crick Institute, London NW1 1AT, UK. guilherme.fernandes@crick.ac.uk.
Abstract:
Over the past few decades, antibacterial discovery has changed substantially, yet innovation has remained slow despite the growing need for new agents active against multidrug-resistant pathogens. Progress is constrained by scientific hurdles, including target selection, penetration and efflux in bacteria, and the difficulty of translating in vitro activity into in vivo efficacy, as well as persistent economic disincentives. Here, we discuss these challenges and summarise recent advances in the field, with a medicinal chemistry focus on synthetic small molecules that have reached validated-lead or preclinical development and shown in vivo antibacterial efficacy. We also provide an outline of the current clinical pipeline, highlighting areas of innovation and remaining gaps. Our goal is to offer a comprehensive perspective on antibacterial discovery that supports ongoing efforts to strengthen the pipeline in response to antimicrobial resistance.
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