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Silicon Flavylium Polymethine Dyes for Shortwave Infrared Imaging
Quintashia D Wilson1, Emily B Mobley1, Eric Y Lin1
1Department of Chemistry & Biochemistry, University of California, Los Angeles, Los Angeles, California 90095, United States.
Journal of the American Chemical Society
|June 25, 2026
Summary
Researchers developed novel silicon-containing flavylium (SiliFlav) dyes for advanced shortwave infrared (SWIR) imaging. These bright, deep-penetrating fluorophores enable high-resolution in vivo visualization in mice.
Area of Science:
- Materials Science
- Biomedical Imaging
- Organic Chemistry
Background:
- Shortwave infrared (SWIR) imaging (1000-2000 nm) offers advantages for in vivo studies, such as reduced scattering and deep-tissue penetration.
- Developing bright small-molecule fluorophores emitting above 1100 nm for SWIR imaging remains a significant challenge.
Purpose of the Study:
- To introduce a new class of silicon-containing flavylium (SiliFlav) polymethine dyes.
- To address the limitations of current fluorophores for deep-tissue SWIR imaging.
- To demonstrate the utility of SiliFlav dyes for in vivo fluorescence imaging.
Main Methods:
- Synthesis of silicon-containing flavylium (SiliFlav) polymethine dyes.
- Characterization of photophysical properties, including emission spectra and quantum yields.
- Formulation of the lead fluorophore (SiliFlav5) into canola oil nanoemulsions.
- In vivo fluorescence imaging in mice to visualize vasculature and spleen.
Main Results:
- Achieved unprecedented bathochromic shifts in emission up to 200 nm by incorporating a silicon heteroatom.
- Maintained respectable fluorescence quantum yields (up to 0.30%).
- Demonstrated bright SWIR emission above 1300 nm with SiliFlav5 nanoemulsions.
- Obtained high-resolution in vivo imaging of mouse vasculature and spleen.
Conclusions:
- SiliFlav polymethine dyes represent a new class of fluorophores for SWIR imaging.
- These dyes overcome key limitations, offering bright emission and deep-tissue penetration.
- SiliFlav dyes provide a promising platform for advanced in vivo deep-tissue SWIR imaging applications.

