Transformer-Driven Explainable Deep Learning with Quantitative Attribution Validation for Liver Tumor Detection
Inzamam Mashood Nasir1, Hend Alshaya2, Sara Tehsin3
1Human-Environment-Technology (HET) Systems Centre, Mykolas Romeris University, 08303 Vilnius, Lithuania.
Bioengineering (Basel, Switzerland)
|June 26, 2026
Summary
This study introduces an explainable deep learning framework for reliable liver tumor detection on CT scans, significantly improving accuracy and localization performance over existing methods.
Area of Science:
- Medical Imaging
- Artificial Intelligence
- Oncology
Background:
- Liver tumor identification on CT scans faces challenges due to tumor heterogeneity, anatomical variations, and the opacity of deep learning models.
- Existing deep learning models often lack interpretability, hindering clinical adoption for liver tumor detection.
Purpose of the Study:
- To develop a reliable and explainable deep learning framework for liver tumor detection on computed tomography (CT) scans.
- To enhance the interpretability of deep learning models in clinical settings for liver tumor identification.
Main Methods:
- A novel deep learning framework combining Global Context (GC) fused with Transformer (Tf) and a Quantitative Attribution (QA) module was developed.
- The framework utilizes gradient-based attribution with a localization module, evaluating spatial alignment without requiring segmentation supervision during training.
- Transformer-Encoders were employed to capture long-range dependencies, improving tumor detection performance.
Main Results:
- The framework achieved high classification performance: 96.9% accuracy, 96.2% precision, 95.8% recall, 96.0% F1-score, 97.6% AUC, and 0.93 MCC.
- Classification-based localization yielded an Intersection over Union (IoU) of 71.6% and a Dice coefficient of 83.5%.
- Demonstrated significant performance improvements compared to existing Convolutional Neural Network (CNN) and Transformer-based systems.
Conclusions:
- The proposed deep learning framework offers a reliable and explainable solution for liver tumor detection on CT scans.
- The integration of attribution mechanisms enhances qualitative evidence, facilitating clinical decision-making.
- The framework shows superior performance and interpretability, paving the way for advanced AI applications in medical diagnostics.

