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Related Concept Videos

Genetic Screens02:46

Genetic Screens

Genetic screens are tools used to identify genes and mutations responsible for phenotypes of interest. Genetic screens help identify individuals or a group of people at risk of developing  genetic diseases and help them with early intervention, targeted therapy, and reproductive options.
Forward genetic screens
Forward or “classical” genetic screens involve creating random mutations in an organism’s DNA using radiation, mutagens, or insertion of additional bases, which result in visible changes...
Pharmacogenomics: Identification of New Drug Targets01:29

Pharmacogenomics: Identification of New Drug Targets

Advances in genomics have profoundly influenced drug discovery by increasing both the speed and accuracy of pharmaceutical development. Pharmacogenomics, which examines how genetic variation influences drug response, facilitates the identification of novel therapeutic targets and enables patient stratification for personalized treatment. These strategies contribute to improved drug efficacy, minimized adverse effects, and more efficient clinical trial design.Mapping genetic differences...
Modern Molecular Taxonomy01:29

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Advancements in molecular biology have revolutionized the identification and characterization of bacteria, with multiple methods leveraging DNA sequencing for enhanced precision. As sequencing technologies improve and costs decline, these approaches are increasingly used in clinical, environmental, and evolutionary studies.Multilocus Sequence Typing (MLST) examines several housekeeping genes, essential chromosomal genes encoding cellular functions, to distinguish strains. Approximately...
Karyotyping01:17

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Describing the number and physical features of chromosomes can reveal abnormalities that underlie genetic diseases. This description is facilitated by special staining techniques that produce a particular banding pattern on each chromosome. State-of-the-art techniques make this approach even more powerful, enabling the detection of individual genes that cause disease.A Simple Chromosome Staining Technique Provides Valuable Scientific InsightSome genetic diseases can be detected by looking at...
Next-generation Sequencing03:00

Next-generation Sequencing

The first human genome sequencing project cost $2.7 billion and was declared complete in 2003, after 15 years of international cooperation and collaboration between several research teams and funding agencies. Today, with the advent of next-generation sequencing technologies, the cost and time of sequencing a human genome have dropped over 100 fold.
Next-Generation Sequencing Methods
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Principles of Pharmacogenetics: Types of Genetic Variants01:27

Principles of Pharmacogenetics: Types of Genetic Variants

The human genome is over 99.9% identical between individuals, yet genetic differences exist at millions of bases. The human genome contains approximately 3 million variant positions per individual, many of which are heterozygous, contributing to genetic diversity and individual traits. Genetic variations include single-nucleotide polymorphisms (SNPs), insertions, deletions, and copy number variations (CNVs).SNPs, the most common variation, involve single-base changes in DNA. These can be...

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Related Experiment Video

Updated: Jun 28, 2026

Candidate Gene Testing in Clinical Cohort Studies with Multiplexed Genotyping and Mass Spectrometry
05:53

Candidate Gene Testing in Clinical Cohort Studies with Multiplexed Genotyping and Mass Spectrometry

Published on: June 21, 2018

From educational to graded: redefining proficiency testing in ABO genotyping.

Reut Hod-Dvorai1, Cathi Murphey2, Valia Bravo-Egana3

  • 1Department of Pathology, SUNY Upstate Medical University, Syracuse, NY, United States.

Human Immunology
|June 26, 2026
PubMed
Summary

ABO genotyping accurately predicts blood type phenotypes, showing high consistency across laboratories. Proficiency testing programs are recommended to ensure quality for clinical transplantation settings.

Keywords:
ABO blood groupsABO genotypingASHIOrgan transplantationProficiency testing

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Area of Science:

  • Immunogenetics
  • Molecular Diagnostics
  • Transfusion Medicine

Background:

  • Serologic typing for ABO blood groups can be inconclusive or unfeasible in certain clinical scenarios.
  • Molecular ABO genotyping offers an alternative method for determining blood type.
  • The clinical utility of ABO genotyping, particularly in transplantation, requires rigorous evaluation of its accuracy and consistency.

Purpose of the Study:

  • To assess the accuracy and inter-laboratory consistency of ABO genotyping compared to serologic methods.
  • To determine the need for a graded proficiency testing (PT) program for ABO genotyping.
  • To evaluate the suitability of molecular ABO typing for routine clinical use in transplantation.

Main Methods:

  • Analysis of data from 2023-2025 ABO genotyping proficiency testing challenges involving 55 specimens.
  • Parallel molecular ABO genotyping of 53 PT specimens using Reverse Transcription Polymerase Chain Reaction (RT-PCR) and Next-Generation Sequencing (NGS).
  • Evaluation of method concordance and phenotype prediction accuracy.

Main Results:

  • 95% of specimens achieved 100% phenotype consensus among participating laboratories.
  • RT-PCR and NGS methods demonstrated high concordance, with a single phenotype discrepancy observed.
  • Six novel O alleles were identified across nine specimens.

Conclusions:

  • ABO genotyping demonstrated 100% phenotype prediction accuracy in this proficiency testing study.
  • Proficiency testing programs are effective for monitoring the analytical performance of ABO genotyping assays.
  • These findings support the increasing adoption of molecular ABO typing for clinical transplantation testing.