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Nucleophiles02:30

Nucleophiles

The word “nucleophile” has a Greek root and translates to nucleus-loving. Nucleophiles are either negatively charged or neutral species with a pair of electrons in a high-energy occupied molecular orbital (HOMO). As these species tend to donate electron pairs, nucleophiles are considered Lewis bases as well. Negatively charged species, like OH−, Cl−, or HS−, with one or several pairs of electrons, are typically nucleophiles. Similarly, neutral species such as ammonia, amines, water, and alcohol...
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When proton-coupled carbon-13 spectra are simplified by a broadband proton decoupling technique, structural information about the coupled protons is lost. Distortionless enhancement by polarization transfer (DEPT) is a technique that provides information on the number of hydrogens attached to each carbon in a molecule. While the DEPT experiment utilizes complex pulse sequences, the pulse delay and flip angle are specifically manipulated. The resulting signals have different phases depending on...
Diels–Alder Reaction: Characteristics of Dienophiles01:24

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In a Diels–Alder reaction, the diene is usually an electron-rich system and acts as a nucleophile, whereas the dienophile is electron-deficient and functions as an electrophile. Much like the diene, the nature of the dienophile significantly impacts the outcome of the reaction.
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Diels–Alder Reaction: Characteristics of Dienes01:29

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The Diels–Alder reaction brings together a diene and a dienophile to form a six-membered ring. Both components have unique characteristics that influence the rate of the reaction.
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The simplest example of a diene is 1,3-butadiene, an acyclic conjugated π system. At room temperature, the molecule exists as a mixture of s-cis and s-trans conformers by virtue of rotation around the carbon–carbon single bond. Although the s-trans isomer is more stable, the...

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A New Straightforward Method for Lipophilicity (logP) Measurement using 19F NMR Spectroscopy
09:32

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Published on: January 30, 2019

Data-Derived Conceptual DFT Nucleophilicity Index.

Bartłomiej Fliszkiewicz1, Hubert Suska1, Stanisław Popiel1

  • 1Faculty of Advanced Technologies and Chemistry Military University of Technology, Warsaw 00-908, Poland.

The Journal of Physical Chemistry. A
|June 29, 2026
PubMed
Summary
This summary is machine-generated.

Existing nucleophilicity descriptors struggle to predict reactivity. This study introduces an empirical index, Nemp, improving predictions by considering molecular structure and solvent effects, outperforming traditional methods.

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Area of Science:

  • Computational Chemistry
  • Quantum Chemistry
  • Organic Chemistry

Background:

  • Accurate characterization of nucleophilicity is crucial but lacks a universal descriptor.
  • Existing conceptual Density Functional Theory (CDFT) indices show limitations in correlating with experimental reactivity.
  • Mayr's reactivity scale is a benchmark for nucleophilicity but requires robust theoretical descriptors.

Purpose of the Study:

  • To evaluate the performance of established conceptual DFT nucleophilicity indices.
  • To develop a novel, data-driven empirical nucleophilicity index (Nemp).
  • To investigate the impact of molecular scaffold on reactivity prediction accuracy.

Main Methods:

  • Utilized semiempirical methods for analyzing nucleophilicity indices.
  • Employed symbolic regression to construct the empirical nucleophilicity index (Nemp).
  • Incorporated frontier orbital energies, CDFT descriptors, Fukui functions, charge information, and solvent characteristics.

Main Results:

  • Tested DFT nucleophilicity indices showed weak correlations with Mayr's scale outside small sets.
  • The global empirical model (Nemp) achieved R2 = 0.737, outperforming conventional descriptors.
  • Refining models by molecular scaffold significantly improved accuracy to R2 = 0.811.

Conclusions:

  • Global CDFT nucleophilicity indices have inherent limitations for broad applicability.
  • Data-driven strategies and context-aware descriptors show significant potential for reactivity prediction.
  • Empirical nucleophilicity indices, especially when scaffold-specific, offer superior predictive power.