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Common and rare variants in complement genes as biomarkers of COVID-19 infection and severity. A lesson to learn for
María Eugenia De La Morena-Barrio1,2, Ana Van Den Rym3,4,5, Olga Escorial Sanz6
1Servicio de Hematología, Hospital Universitario Morales Meseguer, Centro Regional de Hemodonación, Universidad de Murcia, Instituto Murciano de Investigación Biosanitaria (IMIB)-Arrixaca, Murcia, Spain.
Insights
Genetic variants in the complement system influence susceptibility to severe COVID-19. Specific complement gene polymorphisms offer potential biomarkers for predicting disease severity and preparing for future infectious threats.
Area of Science:
- Immunogenetics
- Infectious Disease Epidemiology
Background:
- The first wave of COVID-19 significantly impacted Spain, with high infection and mortality rates.
- While genetic factors influencing immune responses are known, the role of the complement system in COVID-19 susceptibility and severity remains understudied.
Purpose of the Study:
- To investigate the association of complement system-related genetic variants with severe COVID-19 in a Spanish cohort.
- To identify potential genetic biomarkers for predicting COVID-19 severity and future pandemic preparedness.
Main Methods:
- Analysis of whole-exome sequencing data from 154 hospitalized severe COVID-19 patients.
- Examination of common polymorphisms and rare variants within complement genes.
Main Results:
- Common polymorphisms in CFHR4 (rs7417769) and CFH (rs1061170) were linked to protection against acute respiratory distress syndrome (ARDS).
- C3 (rs2230199) and MASP2 (rs7255087) polymorphisms correlated with C3 levels.
- Variants in C1R and C8A, and alleles affecting FCN2/FCN3 levels, suggested a role for defective complement activation and the lectin pathway in COVID-19 pathogenesis.
Conclusions:
- Common variants in complement genes significantly modulate susceptibility to severe COVID-19 and its complications.
- Identified genetic biomarkers may aid in managing SARS-CoV-2 and preparing for emerging infectious diseases.
Introduction:
The first wave of Coronavirus disease 2019 (COVID-19), driven by the global emergence of Severe Acute Respiratory Syndrome Coronavirus 2 (SARS-CoV-2), severely affected Spain with high infection and mortality rates across the country. Although numerous common and rare genetic variants affecting immune-related pathways have been associated with susceptibility to infection and severe disease, the contribution of complement system remains comparatively understudied.
Methods:
In this work, we analyzed the frequencies and severity associations of complotype-related common polymorphisms and rare complement variants in whole-exome sequencing data from a Spanish cohort accounting for 154 adults hospitalized due to severe COVID-19.
Results:
Our results indicate that the CFHR4 rs7417769 (p.N209S) and CFH rs1061170 (p. Y402H) common polymorphisms are significantly associated with protection against acute respiratory distress syndrome (ARDS), while the C3 rs2230199 (p.R102G) and MASP2 rs7255087 (p.D120G) polymorphisms respectively correlated with low and high C3 levels. The marked over-representation of the C1R rs117402032 and C8A rs143523574 polymorphisms and increased frequency of heterozygous carriers of alleles previously associated with low FCN2 and FCN3 levels, suggest a link beween defective complement activation and increased rates of SARS-CoV-2 infection and support a pivotal role for the lectin pathway in the pathogenesis of COVID-19.
Discussion:
Together, these results demonstrate that common variants in complement genes modulate susceptibility to severe COVID-19 and its clinical complications. They also identify promising, testable genetic biomarkers with potential utility not only for SARS-CoV-2, but also for preparedness against future emerging infectious threats.
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