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Updated: Jun 30, 2026

Functionalized Spirocyclic Heterocycle Synthesis and Cytotoxicity Assay
Published on: February 9, 2021
Synthesis, Structural Characterization and Reactivity of Macrocyclic Cyclo[2]malonates
Samuele Ruffoli1, Andrea Vitale1, Kevin D'Addazio1
1Dipartimento di Chimica Giacomo CiamicianCiamician and INSTM Research Unit, Università di Bologna, Via Piero Gobetti, 85, 40129 Bologna, Italy.
Researchers synthesized novel oxygen-bridged cyclo[2]-malonates, achieving selective dimeric macrocycles. These versatile macrocycles exhibit tunable structures and predictable supramolecular assembly, showing potential for molecular recognition and functional materials.
Area of Science:
- Organic Chemistry
- Supramolecular Chemistry
- Materials Science
Background:
- Macrocyclic compounds are crucial in molecular recognition and materials science.
- Synthesizing specific macrocyclic structures, particularly dimeric forms, often presents challenges due to competing oligomerization.
Purpose of the Study:
- To develop a controlled synthesis for a new class of oxygen-bridged cyclo[2]-malonates.
- To investigate the structural, conformational, and supramolecular properties of these novel macrocycles.
- To explore the potential of these macrocycles in molecular recognition, specifically vanadyl ion binding.
Main Methods:
- Condensation reaction between malonyl dichloride and substituted benzylic α,ω-diols.
- Optimization of reaction conditions to favor dimeric macrocycle formation.
- Single-crystal X-ray diffraction for structural and conformational analysis.
- Investigation of supramolecular assembly through intermolecular interactions (hydrogen bonding, halogen bonding).
Main Results:
- Successful controlled synthesis of oxygen-bridged cyclo[2]-malonates, selectively yielding dimeric macrocycles.
- X-ray diffraction confirmed well-defined conformations, tunable cavity sizes, and substituent-dependent stereochemistry.
- Macrocycles self-assemble into interlocked columnar structures stabilized by hydrogen and halogen bonding.
- Vanadyl (VO2+) binding is influenced by macrocycle cavity size and preorganization, indicating a structure-function relationship.
Conclusions:
- Oxygen-bridged cyclo[2]-malonates represent an accessible and versatile macrocyclic platform.
- These macrocycles offer tunable structural features and predictable supramolecular behavior.
- The findings suggest significant potential for applications in molecular recognition and the design of functional materials.
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Stability of Substituted Cyclohexanes
The two chair conformations of cyclohexanes undergo rapid interconversion at room temperature. Both forms have identical energies and stabilities, each comprising equal amounts of the equilibrium mixture. Replacing a hydrogen atom with a functional group makes the two conformations energetically non-equivalent.
For example, in...