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Published on: July 3, 2020
Bayesian evaluation for latent variable models: A tutorial on computing information criteria and bayes factors with
Xiaohui Luo1, Jieyuan Dong1, Hongyun Liu1
1Beijing Key Laboratory of Applied Experimental Psychology, National Demonstration Center for Experimental Psychology Education, Faculty of Psychology, Beijing Normal University.
This study introduces an R package, bleval, for efficient Bayesian model evaluation in psychology. It simplifies computing information criteria and Bayes factors for complex latent variable models.
Area of Science:
- Psychological methodology
- Computational statistics
- Bayesian inference
Background:
- Bayesian model evaluation is vital for latent variable models.
- Computing marginal likelihoods for information criteria and Bayes factors is computationally intensive.
- Applied research lacks practical guidance and software for these evaluations.
Purpose of the Study:
- To provide practical guidance for approximating marginal likelihoods in Bayesian latent variable models.
- To develop user-friendly software (R package bleval) for Bayesian model evaluation.
- To demonstrate the application of bleval in diverse empirical scenarios.
Main Methods:
- Utilizing adaptive Gauss-Hermite quadrature for efficient marginal likelihood approximation.
- Developing the R package 'bleval' for computing information criteria and fully marginal likelihoods.
- Applying bleval to structural equation, item response theory, and multilevel models.
Main Results:
- The bleval package effectively computes information criteria and Bayes factors for Bayesian latent variable models.
- Adaptive Gauss-Hermite quadrature provides an efficient method for marginal likelihood approximation.
- Empirical examples highlight practical considerations for using bleval, including sensitivity analyses.
Conclusions:
- The bleval package offers a practical solution for Bayesian model evaluation in psychology.
- Efficient numerical methods enhance the feasibility of complex model comparisons.
- This work facilitates more rigorous application of Bayesian methods in psychological research.
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