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Updated: Jul 1, 2026

Methods for Electroporation and Transformation Confirmation in Limosilactobacillus reuteri DSM20016
Published on: June 23, 2023
Genetic potential of Limosilactobacillus fermentum 5.1.2 produces metabolite compounds with antioxidant activity
Vidia Nur Riska Parakkasi1, Radhwa Hayyu Aufa Haq1, Rika Indri Astuti2,3
1Microbiology Study Program, Biology Departement, Faculty of Mathematics and Natural Sciences, Graduate School, IPB University, Jl. Agatis, IPB Darmaga Campus, 16680, Bogor, Indonesia.
Abstract:
Limosilactobacillus fermentum 5.1.2, a tempeh-derived probiotic candidate, was investigated through an integrated genome-to-cell approach to evaluate its antioxidant capacity. Whole-genome analysis using GhostKOALA (KEGG) and antiSMASH 7.0 identified a terpene precursor biosynthetic gene cluster and key genes involved in terpenoid backbone (idi, GGPS) and terpenoid-quinone biosynthesis (menA, menB, menC, menE, ubiE). LC-QTOF-MS of the cell-free supernatant extract putatively identified terpenoid and terpenoid-quinone metabolites, including linalyl propionate, geranylbenzoquinone, geranylhydroquinone, theasapogenol A, and momordol. This is consistent with the predicted biosynthetic pathways. The cell-free supernatant exhibited strong DPPH radical-scavenging activity (84.85-88.99% inhibition), while the extract showed antioxidant activity against DPPH and ABTS+ radicals with IC50 values of 660.5647 ± 35.67 µg/mL and 333.886 ± 13.13 µg/mL, respectively. Extract conferred cellular protection to Schizosaccharomyces pombe under H₂O₂-induced oxidative stress, comparable to calorie-restriction and ascorbic acid controls. These findings establish L. fermentum 5.1.2 as a multifunctional probiotic candidate with genomically supported antioxidant capacity.
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