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Updated: Jul 3, 2026

Microbiological Rapid On-Site Evaluation for Pulmonary Infectious Diseases
Published on: March 1, 2024
Bacterial profile and antimicrobial resistance in patients with pulmonary infection: a retrospective tertiary
Jargaltulga Ulziijargal1,2, Ekaterina Faermark1, Usukhbayar Khenchbish1
1School of Medicine, Mongolian National University of Medical Sciences, Ulaanbaatar, 13301, Mongolia.
Background:
Pulmonary infections remain a major cause of global morbidity and mortality, particularly in low- and middle-income countries (LMICs). The rapid emergence of antimicrobial resistance (AMR) has significantly limited therapeutic options and increased healthcare burden. This study aimed to investigate the bacterial profile and AMR patterns among patients with confirmed pulmonary infections at a tertiary referral hospital in Mongolia, where data from tertiary care settings and internationally disseminated studies on AMR are still scarce, especially in the context of pulmonary infections.
Methods:
A retrospective descriptive study was conducted among patients with pulmonary disorders who submitted respiratory specimens for microbiological analysis at Mongolia-Japan Hospital, Ulaanbaatar, between 2023 and 2024. Data were extracted from the electronic medical record (EMR) system. To avoid duplication bias, only the first bacterial isolate recovered from each patient during a single hospitalization episode was included in the analysis. Antimicrobial resistance phenotypes were classified as multidrug-resistant (MDR), extensively drug-resistant (XDR), or pandrug-resistant (PDR) based on the Centers for Disease Control and Prevention (CDC) and the European Centre for Disease Prevention and Control (ECDC) criteria. Clinical characteristics, bacterial profiles, antimicrobial resistance patterns, and clinical outcomes were analyzed.
Results:
A total of 354 patients were included, of whom 276/354 (78.0%) had an identified bacterial pathogen. The most frequently isolated organisms were Klebsiella pneumoniae 100/276 (36.2%), Acinetobacter baumannii 47/276 (17.0%), methicillin-resistant Staphylococcus aureus (MRSA) 30/276 (10.9%), and Pseudomonas aeruginosa 17/276 (6.2%). Multidrug resistance was observed in 22/30 (73.3%) of MRSA isolates, while 15/47 (31.9%) of Acinetobacter baumannii isolates were classified as PDR. Patients with cardiovascular disease were significantly more likely to harbor MDR isolates (cOR: 2.669; 95% CI: 1.048-6.796). All-cause hospital mortality was higher among culture-positive than culture-negative patients (21/112 [18.8%] vs. 1/34 [2.9%], p = 0.024).
Conclusions:
Gram-negative pathogens, particularly Klebsiella pneumoniae and Acinetobacter baumannii, predominated in pulmonary infections and demonstrated substantial AMR. The high burden of MDR/XDR pathogens highlights major therapeutic challenges and underscores the need for enhanced infection control, antimicrobial stewardship, and ongoing resistance surveillance.
Insights
Pulmonary infections in Mongolia show high rates of antimicrobial resistance (AMR), with Klebsiella pneumoniae and Acinetobacter baumannii being common pathogens. This highlights significant challenges in treatment and the urgent need for better infection control.
Area of Science:
- Medical Microbiology
- Infectious Diseases
- Public Health
Background:
- Pulmonary infections are a leading cause of illness and death globally, especially in low- and middle-income countries (LMICs).
- Antimicrobial resistance (AMR) is escalating, limiting treatment options and increasing healthcare costs.
- Data on AMR in Mongolian tertiary care settings for pulmonary infections are limited.
Purpose of the Study:
- To determine the bacterial pathogens causing pulmonary infections in Mongolia.
- To analyze antimicrobial resistance (AMR) patterns, including multidrug-resistant (MDR), extensively drug-resistant (XDR), and pandrug-resistant (PDR) phenotypes.
- To investigate clinical characteristics and outcomes associated with these infections.
Main Methods:
- Retrospective descriptive study of patients with pulmonary disorders from 2023-2024 at Mongolia-Japan Hospital.
- Analysis of respiratory specimens and electronic medical records (EMR).
- Classification of AMR based on CDC/ECDC criteria; inclusion of only the first isolate per patient per hospitalization.
Main Results:
- Bacterial pathogens identified in 78.0% of 354 patients.
- Most common pathogens: Klebsiella pneumoniae (36.2%), Acinetobacter baumannii (17.0%), MRSA (10.9%), Pseudomonas aeruginosa (6.2%).
- High AMR rates: 73.3% of MRSA were MDR, 31.9% of Acinetobacter baumannii were PDR. Cardiovascular disease patients had higher odds of MDR isolates. All-cause mortality was higher in culture-positive patients.
Conclusions:
- Gram-negative bacteria, especially K. pneumoniae and A. baumannii, are prevalent in Mongolian pulmonary infections with significant AMR.
- The high prevalence of MDR/XDR pathogens presents major therapeutic challenges.
- Enhanced infection control, antimicrobial stewardship, and surveillance are crucial.
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