Epigenetic regulation of non-apoptotic regulated cell death
Amr Ali Mohamed Abdelgawwad El-Sehrawy1, Ghaleb Oriquat2, Lola Razyikova3
1Internal medicine, Diabetes, Endocrinology and Metabolism, Mansoura University, Mansoura, Egypt.
Abstract:
For decades, apoptosis has reigned supreme in cell death therapeutics, yet its clinical limitations in resistant cancers and degenerative diseases have unveiled the critical role of non-apoptotic regulated cell death (RCD) pathways, including ferroptosis, necroptosis, pyroptosis, and parthanatos. This review examines chromatin as a key regulatory layer influencing these pathways through dynamic histone modifications, DNA methylation, non-coding RNAs, and 3D genome architecture. We dissect how chromatin landscapes integrate metabolic, oxidative, and inflammatory signals in a cell-type- and lineage-dependent manner to steer cell fate, thereby enabling context-specific RCD activation or suppression. Emerging evidence suggests that epigenetic dysregulation can silence tumor-suppressive cell-death regulators such as GSDME and RIPK3 in some cancers and may contribute to neuronal susceptibility to parthanatos in specific neurodegenerative models. Therapeutically, the reversibility of epigenetic marks makes HDAC/DNMT inhibitors, BET-targeting agents, and CRISPR/dCas9-based editing attractive candidates for re-sensitizing selected preclinical models to RCD inducers; however, their clinical value will depend on improving tissue selectivity, minimizing toxicity, and demonstrating durable efficacy in heterogeneous patient tumors. Nanotechnology may improve delivery, but it does not fully overcome systemic exposure or targeting barriers. Emerging frontiers (single-cell epigenomics, phase-separated biomolecular condensates, and mitochondrial-nuclear crosstalk) may help identify candidate biomarkers and vulnerabilities, but these remain incompletely validated. By shifting from a genetic to a chromatin-centric paradigm and explicitly accounting for cell-type-specific chromatin states, this review highlights a promising framework for overcoming cell-death resistance, while recognizing that most pathway links, biomarkers, and delivery strategies still require robust validation in vivo and across patient cohorts before broad clinical translation.
Insights
Chromatin regulation is key to overcoming resistance in non-apoptotic regulated cell death (RCD) pathways for treating cancers and neurodegenerative diseases. Epigenetic therapies offer promise but require further validation for clinical translation.
Area of Science:
- Cell biology
- Epigenetics
- Therapeutics
Background:
- Apoptosis has limitations in treating resistant cancers and degenerative diseases.
- Non-apoptotic regulated cell death (RCD) pathways (ferroptosis, necroptosis, pyroptosis, parthanatos) are critical alternatives.
- Chromatin's role in regulating these RCD pathways is increasingly recognized.
Purpose of the Study:
- To review chromatin as a central regulatory layer influencing non-apoptotic RCD pathways.
- To dissect how chromatin landscapes integrate cellular signals to control cell fate.
- To explore therapeutic strategies targeting chromatin for RCD pathway modulation.
Main Methods:
- Review of existing literature on chromatin, epigenetics, and RCD pathways.
- Analysis of how histone modifications, DNA methylation, non-coding RNAs, and 3D genome architecture influence RCD.
- Examination of emerging therapeutic approaches and future research directions.
Main Results:
- Chromatin landscapes integrate metabolic, oxidative, and inflammatory signals to determine cell fate and RCD activation or suppression.
- Epigenetic dysregulation can silence tumor-suppressive cell-death regulators, contributing to treatment resistance.
- Epigenetic modifiers (HDAC/DNMT inhibitors, BET-targeting agents) and CRISPR/dCas9 editing show therapeutic potential for RCD re-sensitization.
Conclusions:
- A chromatin-centric paradigm is crucial for understanding and overcoming cell-death resistance.
- Epigenetic therapies offer a promising avenue for RCD-based treatments, but require improved selectivity and efficacy.
- Further validation of biomarkers, delivery strategies, and therapeutic targets in vivo and in patient cohorts is essential for clinical translation.
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