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Updated: Jul 4, 2026

Assessing Cellular Target Engagement by SHP2 (PTPN11) Phosphatase Inhibitors
Published on: July 17, 2020
FAM122A inhibition of PP2A-B55 through a bipartite binding mechanism
Iker Benavides-Puy1,2, Suzanne Vigneron3, Arminja N Kettenbach4,5
1Center for Epigenetic Cell Memory, Danish Cancer Institute, 2100 Copenhagen, Denmark.
Abstract:
FAM122A (also known as PABIR1) regulates cell cycle progression through inhibition of the PP2A-B55 phosphoprotein phosphatase. Recent structural work has uncovered helical elements in the N-terminus of FAM122A as binding determinants for PP2A-B55 but whether FAM122A inhibition towards PP2A-B55 is regulated is presently unclear. To address this, we performed a systematic analysis of the PP2A-B55 interaction with FAM122A in cells uncovering a novel region in the C-terminus of FAM122A, spanning residues 150-170, required for binding. This C-terminal region and the N-terminal helices are both required for efficient binding to PP2A-B55 suggesting a bipartite binding mechanism. We perform amino acid resolution scans of FAM122A 150-170 uncovering several residues in this region contributing to binding including the conserved Ser158, a reported phosphorylation site. We show that Ser158 is important for PP2A-B55 inhibition in human cells as well as efficient stimulation of mitotic entry in Xenopus laevis egg extracts. In human cells and in Xenopus laevis Ser158 phosphorylation is regulated, with increased occupancy correlating with cell cycle stages requiring PP2A-B55 inhibition. Collectively our work uncovers novel aspects of the FAM122A interaction with PP2A-B55 and provides a possible mechanism for how the inhibitory activity of FAM122A can be regulated during the cell cycle.
Insights
FAM122A regulates cell division by inhibiting PP2A-B55 phosphatase. Its binding and inhibitory activity are controlled by a novel C-terminal region and phosphorylation of Ser158 during the cell cycle.
Area of Science:
- Cell Biology
- Molecular Biology
- Biochemistry
Background:
- FAM122A protein regulates cell cycle progression by inhibiting the PP2A-B55 phosphoprotein phosphatase.
- Previous studies identified N-terminal helical elements in FAM122A critical for PP2A-B55 binding.
- The regulatory mechanism of FAM122A's inhibitory activity on PP2A-B55 remained unclear.
Purpose of the Study:
- To systematically analyze the interaction between FAM122A and PP2A-B55 in cellular contexts.
- To identify novel regions and regulatory mechanisms governing FAM122A's inhibition of PP2A-B55.
- To elucidate the role of Ser158 phosphorylation in FAM122A function during the cell cycle.
Main Methods:
- Systematic cellular analysis of FAM122A-PP2A-B55 interactions.
- Amino acid resolution scans of the FAM122A C-terminus (residues 150-170).
- Functional assays in human cells and Xenopus laevis egg extracts to assess mitotic entry and phosphatase inhibition.
Main Results:
- A novel C-terminal region (residues 150-170) of FAM122A is essential for PP2A-B55 binding, complementing the N-terminal helices for a bipartite binding mechanism.
- Amino acid scans identified key residues within the C-terminus, including Ser158, that contribute to binding.
- Ser158 phosphorylation is crucial for PP2A-B55 inhibition in human cells and mitotic entry stimulation in Xenopus, with phosphorylation levels correlating with cell cycle stages.
Conclusions:
- FAM122A employs a bipartite binding mechanism involving both N-terminal and C-terminal regions for PP2A-B55 interaction.
- Serine 158 phosphorylation acts as a key regulatory switch for FAM122A's inhibitory activity on PP2A-B55.
- This study provides insights into the cell cycle-dependent regulation of FAM122A's function, impacting cell cycle progression.
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