Related Experiment Video
Updated: Jul 8, 2026

Computation of Atmospheric Concentrations of Molecular Clusters from ab initio Thermochemistry
Published on: April 8, 2020
Nuclear Quantum Effects on the Organic Bifurcation Reaction in Microsolvated Water Clusters: Ring-Polymer Molecular
Shoto Nakagawa1, Hayato Matsubuchi1, Haruki Ota1
1Department of Chemistry, Saitama University, Saitama, Japan.
Nuclear quantum effects (NQEs) significantly alter organic reaction pathways in water. Ring-polymer molecular dynamics (RPMD) simulations show NQEs favor minor product channels and accelerate proton transfer, crucial for accurate aqueous reaction predictions.
Area of Science:
- Computational Chemistry
- Physical Chemistry
- Organic Reaction Mechanisms
Background:
- Solvent environments profoundly influence organic reaction mechanisms compared to gas-phase or nonpolar conditions.
- Explicit solvation models, treating individual solvent molecules, are increasingly used to simulate organic reactions, capturing solvent dynamics.
- Nuclear quantum effects (NQEs) are vital for accurate simulations of aqueous systems.
Purpose of the Study:
- To investigate the bifurcation reaction between 2-aminoacrolein and 1,3-butadiene in microsolvated water clusters.
- To compare simulation results using ring-polymer molecular dynamics (RPMD) with classical molecular dynamics (MD).
- To elucidate the impact of NQEs on aqueous reaction branching and proton-transfer kinetics.
Main Methods:
- Simulations of microsolvated (H2O)n clusters (n=5, 15, 45) using ring-polymer molecular dynamics (RPMD).
- Comparison of RPMD results with prior classical molecular dynamics (classical MD) simulations.
- Analysis of branching fractions and proton-transfer events.
Main Results:
- RPMD simulations showed an increased tendency towards the minor (4+2) product pathway compared to classical MD.
- Zero-point energy contributions in RPMD simulations influenced the distribution across vibrational modes.
- RPMD revealed significantly accelerated proton-transfer events, highlighting the role of NQEs.
Conclusions:
- Accurate prediction of aqueous reaction branching behavior necessitates explicit solvation models.
- Rigorous inclusion of nuclear quantum effects (NQEs), including zero-point energy and proton delocalization, is essential for reliable simulations.
- NQEs play a substantial role in aqueous reaction dynamics even at room temperature (300 K).
Related Concept Videos
Chemical Shift: Internal References and Solvent Effects
The internal reference compound generally used in NMR spectroscopy is tetramethylsilane (TMS). TMS is preferred because it is chemically inert, soluble in NMR solvents, and easily removable. Also, the highly shielded methyl protons in TMS yield an intense...
Solvating Effects
Molecular Orbital Theory II
π Electron Effects on Chemical Shift: Overview
Entropy and Solvation
Stability of Substituted Cyclohexanes
The two chair conformations of cyclohexanes undergo rapid interconversion at room temperature. Both forms have identical energies and stabilities, each comprising equal amounts of the equilibrium mixture. Replacing a hydrogen atom with a functional group makes the two conformations energetically non-equivalent.
For example, in...

