Selective human trypsin inhibitors from cyanobacteria
Xiaodan Ouyang1, Muhammad N Ahmed1,2, Matti Wahlsten2
1Department of Clinical Chemistry and Haematology, Faculty of Medicine, University of Helsinki and Helsinki University Hospital, P.O. Box 63 (Haartmaninkatu 8), FIN-00014 University of Helsinki, Finland.
Journal of Applied Microbiology
|July 7, 2026
Summary
Cyanobacteria extracts show selective inhibition of human trypsin isoenzymes, offering potential for new drug development. This study screened 505 strains, identifying promising natural products for protease inhibitor research.
Area of Science:
- Bioprospecting
- Natural Product Chemistry
- Enzyme Inhibition
Background:
- Aberrant human trypsin isoenzyme activity is linked to diseases such as cancer.
- Selective inhibition of human trypsin isoenzymes is challenging due to their high structural and catalytic similarity.
- Cyanobacteria are a rich source of diverse serine protease inhibitors with pharmaceutical potential.
Purpose of the Study:
- To investigate cyanobacteria as producers of selective inhibitors against human trypsin isoenzymes.
- To identify cyanobacterial strains and metabolites with selective inhibitory activity against human trypsin isoenzymes.
Main Methods:
- Screening of 505 aqueous cyanobacterial extracts from the Baltic Sea and Finnish lakes for inhibitory activity against human trypsin isoenzymes.
- Evaluation of selective extracts against plasma-kallikrein (KLK), bovine trypsin, Factor Xa, and thrombin.
- Molecular networking using high-resolution mass spectrometry to identify known and novel metabolites.
Main Results:
- 19% of tested cyanobacterial strains (98/505) exhibited inhibitory activity against one or more human trypsin isoenzymes.
- Specific extracts showed preferential inhibition of trypsin-1/trypsin-2 (24 strains), trypsin-2/trypsin-3 (8 strains), or trypsin-2 alone (7 strains).
- Molecular networking revealed both known and potentially novel metabolites, indicating diverse inhibitory compounds.
Conclusions:
- Cyanobacteria harbor a rich diversity of metabolites with selective inhibitory activity against human trypsin isoenzymes.
- These findings suggest cyanobacteria as a valuable resource for developing novel protease inhibitors.
- The identified compounds could serve as a starting point for therapeutic drug development targeting trypsin-related diseases.


