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Quantifying cortical lesions in multiple sclerosis MRI datasets using multi-contrast post-processing and deep

Michael G Dwyer1, Niels Bergsland2, Alexander Bartnik2

  • 1Buffalo Neuroimaging Analysis Center, Department of Neurology, Jacobs School of Medicine and Biomedical Sciences, University at Buffalo, State University of New York, Buffalo, NY, USA. mgdwyer@buffalo.edu.

Communications Medicine
|July 7, 2026
PubMed
Summary
This summary is machine-generated.

New magnetic resonance imaging (MRI) methods enhance visualization of multiple sclerosis (MS) cortical lesions. Combining advanced techniques improves lesion detection and quantification in clinical trials.

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Area of Science:

  • Neurology
  • Radiology
  • Medical Imaging

Background:

  • Multiple sclerosis (MS) is a chronic neurological disease impacting the central nervous system.
  • Cortical lesions are key in MS, but difficult to visualize with standard MRI, limiting clinical trial analysis.
  • Advanced MRI post-processing techniques, including AI, show promise for improved cortical lesion detection.

Purpose of the Study:

  • To evaluate a unified framework combining and extending existing methods for enhanced cortical lesion detection in MS.
  • To assess the feasibility of using synthetic contrasts and AI-based approaches on conventional MRI data.
  • To reanalyze existing clinical trial data for mechanistic insights into MS development and treatment effects.

Main Methods:

  • Utilized data from the large, multicenter, phase 3 ORATORIO trial.
  • Evaluated fluid-attenuated inversion recovery squared (FLAIR²), T1/T2 ratio, and AI-derived double inversion recovery (AI-DIR).
  • Introduced a novel multi-modal cortical lesion enhanced (MMCLE) contrast and employed transformer-based semantic segmentation for automated lesion detection.

Main Results:

  • Detected an average of 14.8 ± 20.72 lesions per participant at baseline.
  • Achieved an 86.0% true positive rate and 8.4% false positive rate with blinded MMCLE.
  • Demonstrated high reproducibility across different field strengths and acquisition types (ICC 88.8-92.5%).

Conclusions:

  • Confirmed that advanced MRI methods enable clear visualization and quantification of cortical lesions in MS.
  • Validated that the simultaneous use of multiple contrasts, enhanced by deep learning, significantly improves lesion quantification.