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Published on: March 18, 2012
Bilirubin Reductase from Mediterraneibacter gnavus: Positional Reduction Preferences and Transient-State Analysis
Corine O Smith1, Graham R Moran1
1Department of Chemistry and Biochemistry, Loyola University Chicago, 1068 W Sheridan Rd Chicago, Illinois 60660, United States.
Bilirubin reductase (BilR) catalyzes bilirubin excretion by reducing vinylic bonds. This study reveals MgBilR prefers NADH and shows a 4-fold preference for reducing α-vinylic over enamine bonds.
Area of Science:
- Biochemistry
- Enzymology
- Metabolic pathways
Background:
- Bilirubin excretion involves reduction of vinylic bonds by bilirubin reductase (BilR).
- BilR utilizes four NADHs for this transformation, facing challenges due to bilirubin's asymmetry.
- Structural predictions suggest BilR homology with dienoyl-CoA and napthoyl-CoA reductases, featuring FAD, Fe4S4, and FMN cofactors.
Purpose of the Study:
- To conduct anaerobic kinetic and mechanistic analysis of bilirubin reductase from Mediterraneibacter gnavus (MgBilR).
- To elucidate the stereochemistry of hydride transfer and substrate preference of MgBilR.
- To understand the multi-step reduction process and bond selectivity of MgBilR.
Main Methods:
- Anaerobic kinetic and mechanistic studies.
- Solvent exchange studies to determine hydride transfer stereochemistry.
- Transient-state and single-turnover kinetics, including NMR tracking.
Main Results:
- MgBilR reduction stereochemistry is defined as ProS for hydride transfer from NADH.
- NADH is the preferred reductant over NADPH by four orders of magnitude.
- Catalytically relevant reduction occurs primarily during the first hydride transfer; bilirubin reduction is rate-limiting.
Conclusions:
- MgBilR exhibits a preference for NADH and a 4-fold preference for reducing α-vinylic bonds over enamine bonds.
- The reduction process involves distinct phases of flavin and bilirubin reduction.
- MgBilR's substrate selectivity is primarily determined by the rate of hydride transfer to the oxidant.
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