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Updated: Jul 10, 2026

An Integrated Platform for Genome-wide Mapping of Chromatin States Using High-throughput ChIP-sequencing in Tumor Tissues
Published on: April 5, 2018
Mechanistic analysis on epigenetic programming of tumor drug resistance
Xiao-Xiao Han1, Kun Pang2, Jia-Hao Sun3
1Department of Urology, The Fourth Affiliated Hospital of Soochow University, Soochow, China.
Abstract:
Drug resistance remains a critical clinical bottleneck restricting long-term curative efficacy of chemo-, targeted, and other therapies against human malignancies. Drug-tolerant persister (DTP) cancer cells and intratumoral heterogeneity substantially compromise therapeutic responses and worsen patient clinical prognosis. This review summarizes core epigenetic regulatory mechanisms of drug resistance, including DNA methylation, histone modifications, non-coding RNAs (ncRNAs), N⁶-methyladenosine (m⁶A) RNA methylation, and metabolism-epigenetic crosstalk axis, elaborating the mechanistic links between epigenetic programming and the acquisition of tumor drug resistance. The dynamic epigenetic alterations remodel aberrant transcriptional landscapes to empower cancer cells to circumvent cytotoxic drug elimination. Distinct from irreversible genomic mutations, epigenetic modifications are pharmacologically reversible; such biological plasticity enables combinatorial regimens pairing epigenetic modulators with conventional cytotoxic agents as a viable strategy to reverse therapeutic resistance. In-depth dissection of the epigenetic regulatory networks facilitates identification of novel epigenetic biomarkers and druggable targets, providing rationale for developing personalized combination therapies and ultimately improving clinical outcomes of drug-resistant cancer patients.
Insights
Epigenetic mechanisms drive cancer drug resistance by altering gene expression. Targeting these reversible modifications offers a promising strategy to overcome treatment failure and improve patient outcomes.
Area of Science:
- Oncology
- Epigenetics
- Cancer Biology
Background:
- Drug resistance is a major obstacle in cancer therapy, limiting treatment efficacy and worsening patient prognosis.
- Drug-tolerant persister (DTP) cells and tumor heterogeneity contribute significantly to therapeutic failure.
- Understanding the mechanisms of drug resistance is crucial for developing effective cancer treatments.
Purpose of the Study:
- To review the core epigenetic regulatory mechanisms underlying cancer drug resistance.
- To elucidate the mechanistic links between epigenetic programming and the acquisition of drug resistance.
- To highlight the potential of targeting epigenetic modifications for overcoming therapeutic resistance.
Main Methods:
- Literature review of epigenetic mechanisms in cancer drug resistance.
- Analysis of DNA methylation, histone modifications, non-coding RNAs (ncRNAs), and N6-methyladenosine (m6A) RNA methylation.
- Exploration of the metabolism-epigenetic crosstalk axis in drug resistance.
Main Results:
- Dynamic epigenetic alterations reprogram transcriptional landscapes, enabling cancer cells to evade drug-induced death.
- Epigenetic modifications, unlike genomic mutations, are pharmacologically reversible.
- Combinatorial therapies involving epigenetic modulators and conventional agents show promise in reversing resistance.
Conclusions:
- Epigenetic reprogramming is a key driver of cancer drug resistance.
- The reversibility of epigenetic changes offers therapeutic opportunities.
- Targeting epigenetic networks can lead to novel biomarkers and personalized combination therapies for drug-resistant cancers.
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