Jove
Visualize
Contact Us
JoVE
x logofacebook logolinkedin logoyoutube logo
ABOUT JoVE
OverviewLeadershipBlogJoVE Help Center
AUTHORS
Publishing ProcessEditorial BoardScope & PoliciesPeer ReviewFAQSubmit
LIBRARIANS
TestimonialsSubscriptionsAccessResourcesLibrary Advisory BoardFAQ
RESEARCH
JoVE JournalMethods CollectionsJoVE Encyclopedia of ExperimentsArchive
EDUCATION
JoVE CoreJoVE BusinessJoVE Science EducationJoVE Lab ManualFaculty Resource CenterFaculty Site
Terms & Conditions of Use
Privacy Policy
Policies

Related Concept Videos

Microorganisms in Agriculture and Food industry01:27

Microorganisms in Agriculture and Food industry

Microorganisms play a crucial role in agriculture and the food industry, contributing to soil fertility, crop protection, and food production. Their functions range from nitrogen fixation and biopesticide production to fermentation and food preservation, making them indispensable to sustainable farming and food safety.Role in AgricultureNitrogen-fixing bacteria, such as Rhizobium (symbiotic) and Azotobacter (free-living), convert atmospheric nitrogen into ammonia through biological nitrogen...
Microbe-Plant Interactions01:09

Microbe-Plant Interactions

Microbe-plant interactions represent a dynamic spectrum of associations shaped by intricate chemical signaling. These interactions can be neutral, beneficial, or detrimental, and profoundly influence plant physiology, growth, and ecosystem function. The plant microbiome, comprising bacteria, fungi, archaea, protists, and viruses, plays a pivotal role in mediating these effects through surface colonization, internal colonization, or systemic symbiosis.Mutualistic associations, particularly with...
Environmental Applications of Microorganisms01:30

Environmental Applications of Microorganisms

Microorganisms play a pivotal role in maintaining ecosystem balance by recycling essential elements such as carbon, nitrogen, and phosphorus, as well as supporting processes like bioremediation, wastewater treatment, and biofuel production.Microbes in Elemental CyclesIn the carbon cycle, microorganisms decompose organic matter, releasing carbon dioxide via aerobic respiration. This carbon dioxide is subsequently used by photosynthetic organisms to synthesize organic compounds, closing the...
Microbes in the Production of Fermented Foods01:27

Microbes in the Production of Fermented Foods

Lactic acid bacteria (LAB) and molds are instrumental in fermenting plant-based foods to enhance preservation and ensure year-round availability. These microbial processes convert plant carbohydrates into organic acids and other metabolites that inhibit spoilage organisms and contribute to the sensory qualities of the final product.In sauerkraut production, cabbage goes through a microbial succession that starts with cocci such as Leuconostoc mesenteroides. These microbes begin fermentation by...
Microbes in Food Production01:29

Microbes in Food Production

Microbial fermentation is central to food biotechnology, enhancing flavor, texture, preservation, and stability. Fermentative microorganisms metabolize carbohydrates into organic acids, alcohols, and other metabolites that inhibit spoilage organisms and improve digestibility while contributing distinctive sensory qualities.In baking, amylases naturally present in flour hydrolyze starch into monosaccharides such as glucose, which Saccharomyces cerevisiae ferments anaerobically. Through...
The Roles of Bacteria and Fungi in Plant Nutrition02:11

The Roles of Bacteria and Fungi in Plant Nutrition

Plants have the impressive ability to create their own food through photosynthesis. However, plants often require assistance from organisms in the soil to acquire the nutrients they need to function correctly. Both bacteria and fungi have evolved symbiotic relationships with plants that help the species to thrive in a wide variety of environments.

You might also read

Related Articles

Articles linked to this work by shared authors, journal, and citation graph.

Sort by
Same author

Barriers and Facilitators to Implementing Interventions for Improving Medication Adherence in Older Patients With Hypertension: A Scoping Review.

Journal of clinical nursing·2026
Same author

Coordinated Cell-Wall and Starch Maturation Is Associated with Winter-Harvest Quality in <i>Sparganium stoloniferum</i> Tubers.

International journal of molecular sciences·2026
Same author

Ceritinib induces ferroptosis via TRIM21-mediated GLUT1 ubiquitination and AMPK-driven metabolic reprogramming in breast cancer.

iScience·2026
Same author

Physiological artefact control in real-time fMRI neurofeedback - A systematic review and meta-analysis.

Imaging neuroscience (Cambridge, Mass.)·2026
Same author

The plant microbiota: From theoretical advances to applications.

Fundamental research·2026
Same author

S100A8/A9: key regulatory factors in programmed cell death networks and disease progression.

Biochemical pharmacology·2026

Related Experiment Video

Updated: Jul 10, 2026

Ecosystem Fabrication (EcoFAB) Protocols for The Construction of Laboratory Ecosystems Designed to Study Plant-microbe Interactions
11:57

Ecosystem Fabrication (EcoFAB) Protocols for The Construction of Laboratory Ecosystems Designed to Study Plant-microbe Interactions

Published on: April 10, 2018

Engineering plant-associated microbiome for agriculture.

Jingying Zhang1, Qianhang Zhai1, Yang Bai1

  • 1State Key Laboratory for Gene Function and Modulation Research, Peking-Tsinghua Center for Life Sciences, Peking-Tsinghua-NIBS Graduate Program, New Cornerstone Science Laboratory, School of Life Sciences, Peking University, Beijing 100871, China.

Cell Host & Microbe
|July 8, 2026
PubMed
Summary
This summary is machine-generated.

Engineered plant microbiomes offer sustainable agriculture solutions. Strategies include synthetic communities and AI design, addressing lab-to-field translation failures with ecology-centric principles.

More Related Videos

A Gnotobiotic System for Studying Microbiome Assembly in the Phyllosphere and in Vegetable Fermentation
07:51

A Gnotobiotic System for Studying Microbiome Assembly in the Phyllosphere and in Vegetable Fermentation

Published on: June 3, 2020

Related Experiment Videos

Last Updated: Jul 10, 2026

Ecosystem Fabrication (EcoFAB) Protocols for The Construction of Laboratory Ecosystems Designed to Study Plant-microbe Interactions
11:57

Ecosystem Fabrication (EcoFAB) Protocols for The Construction of Laboratory Ecosystems Designed to Study Plant-microbe Interactions

Published on: April 10, 2018

A Gnotobiotic System for Studying Microbiome Assembly in the Phyllosphere and in Vegetable Fermentation
07:51

A Gnotobiotic System for Studying Microbiome Assembly in the Phyllosphere and in Vegetable Fermentation

Published on: June 3, 2020

Area of Science:

  • Agricultural Science
  • Microbiology
  • Synthetic Biology

Background:

  • Engineered plant-associated microbiomes represent a significant advancement for sustainable agriculture.
  • Developing effective microbiome strategies requires understanding complex ecological interactions.

Purpose of the Study:

  • To explore five key strategies for engineering plant-associated microbiomes.
  • To identify reasons for the failure of laboratory-developed strategies to translate to field applications.
  • To advocate for the adoption of ecology-centric design principles in microbiome engineering.

Main Methods:

  • Review and synthesis of current strategies in microbiome engineering.
  • Analysis of factors contributing to laboratory-to-field translation challenges.
  • Discussion of ecological principles for designing robust microbial communities.

Main Results:

  • Five primary strategies for engineered microbiomes are identified: synthetic community design, native bacterial strain engineering, host-microbe co-adaptation, AI-driven design, and microbe-derived compounds.
  • Repeated failures in translating engineered microbiomes from laboratory to field settings are attributed to a lack of ecological considerations.
  • Ecology-centric design principles are crucial for the success of engineered microbiomes.

Conclusions:

  • Successful implementation of engineered plant microbiomes hinges on integrating ecological principles.
  • Future research should prioritize field-relevant conditions and host-microbe interactions.
  • A shift towards ecology-centric design is essential for realizing the potential of engineered microbiomes in sustainable agriculture.