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Validation of a pan-ELastography Machine-learning (ELM) score to predict clinically significant portal hypertension
Mauro Giuffrè1, Simone Kresevic2, Federico Ravaioli3
1Department of Medical, Surgical, and Health Sciences, University of Trieste, Trieste, Italy.
Insights
A new machine learning (ML) model accurately identifies clinically significant portal hypertension (CSPH) in advanced chronic liver disease (ACLD) patients, reducing indeterminate cases and improving non-invasive diagnosis for potential non-selective beta-blocker (NSBB) therapy.
Area of Science:
- Hepatology and Gastroenterology
- Medical Imaging and Diagnostics
- Machine Learning in Medicine
Background:
- Clinically significant portal hypertension (CSPH) is a critical determinant of decompensation and mortality in advanced chronic liver disease (ACLD).
- Current non-invasive criteria (Baveno-VII) for CSPH identification have limitations, including a high proportion of indeterminate ('gray-zone') results and variability across elastography techniques.
- Spleen stiffness measurement (SSM) has shown promise in improving CSPH assessment, but integration with liver stiffness measurement (LSM) and clinical data is needed.
Purpose of the Study:
- To develop and validate a machine-learning (ML) model integrating pan-elastographic LSM and SSM with clinical variables to enhance the accuracy of CSPH rule-out and rule-in.
- To minimize the indeterminate ('gray-zone') results in identifying patients with CSPH compared to existing non-invasive criteria.
- To support safer and broader non-invasive identification of ACLD patients eligible for non-selective beta-blocker (NSBB) therapy.
Main Methods:
- Analysis of 1,435 compensated ACLD patients with paired hepatic venous pressure gradient (HVPG), LSM, SSM, and clinical parameters.
- Harmonized LSM/SSM data from vibration-controlled transient elastography (VCTE), 2D-SWE, and point-SWE were integrated with clinical variables (platelet count, Child-Pugh score, age, gender, etiology) for model training and internal validation.
- External validation in 342 patients compared the ML model's performance against Baveno-VII, Baveno-SSM criteria, and established scores (ANTICIPATE, NICER) in VCTE subgroups.
Main Results:
- The developed Random Forest-based ML model (ELM Score) demonstrated high performance in external validation (AUC=0.91, Brier Score=0.13).
- The ML model significantly reduced the gray zone to 12.3% compared to Baveno-VII (47.9%), Baveno-SSM-dual (38.6%), and Baveno-SSM-single (19.6%) criteria (p<0.001).
- In the VCTE subgroup, the ELM Score achieved comparable rule-in performance to ANTICIPATE and NICER while further reducing the gray zone to 12.0%.
Conclusions:
- The ELM Score, integrating multi-modal elastography and clinical data, significantly outperforms current Baveno criteria in identifying CSPH across different elastography techniques.
- This ML-based approach markedly reduces indeterminate cases, enabling broader, safer, and non-invasive identification of ACLD patients with HVPG-defined CSPH.
- The ELM Score supports improved patient selection for NSBB therapy, potentially improving outcomes in advanced chronic liver disease.
Background & Aims:
The non-invasive Baveno VII criteria for clinically significant portal hypertension (CSPH), based on liver stiffness measurement (LSM) and platelet count (PLT), yield indeterminate ("gray-zone") results in approximately 40-50% of patients, and their performance varies across etiologies and elastography techniques. Spleen stiffness measurement (SSM) has been proposed to improve the accuracy of the Baveno-VII CSPH criteria. We developed and validated the ELM score, a machine learning-based model integrating pan-elastographic LSM and SSM with clinical variables to improve accuracy for CSPH diagnosis, while minimizing indeterminate classifications.
Methods:
We analyzed 1,435 patients with compensated advanced chronic liver disease who underwent paired hepatic venous pressure gradient measurements, LSM, SSM, and clinical assessment. LSM and SSM were obtained using vibration-controlled transient elastography, two-dimensional shear-wave elastography, or point shear-wave elastography. Models were trained (n = 943) and internally validated (n = 150) using harmonized elastography measurements and clinical variables. External validation was performed in 342 patients from seven centers. Cut-offs were selected to maximize rule-out and rule-in performance and compared with the Baveno VII criteria, Baveno-SSM criteria, and, in the vibration-controlled transient elastography subgroup, the ANTICIPATE and NICER scores.
Results:
A random forest-based model achieved the highest performance in the external validation cohort (AUC = 0.91; Brier score = 0.13). Cut-offs of ≤0.45 (rule-out) and ≥0.60 (rule-in) yielded a negative predictive value of 0.91 (95% CI 0.84-0.95) and a positive predictive value of 0.96 (95% CI 0.92-0.98). The ELM score reduced the gray zone to 12.3%, compared with 47.9% for the Baveno VII criteria (p <0.001), 38.6% for the Baveno-SSM dual cut-off criteria (p <0.001), and 19.6% for the Baveno-SSM single cut-off criteria (p <0.05). In the vibration-controlled transient elastography external validation subgroup (n = 275), the ELM score achieved rule-in performance comparable to that of the ANTICIPATE and NICER scores while reducing the gray zone to 12.0%, compared with 38.2% and 26.5%, respectively.
Conclusions:
The ELM score outperformed the current Baveno VII criteria and substantially reduced the gray zone across elastography modalities, supporting broader and safer non-invasive identification of patients with CSPH who may benefit from non-selective beta-blocker therapy.
Impact And Implications:
Clinically significant portal hypertension is central to prognosis in compensated advanced chronic liver disease, yet current non-invasive strategies classify 40-50% of patients as indeterminate. This study introduces a pan-elastography machine-learning model that integrates liver and spleen stiffness with clinical variables to address this limitation. The results are important for hepatologists and healthcare systems because the ELM score reduced the diagnostic gray zone to ∼12% in external validation, compared with 47.9% for Baveno VII, while maintaining high rule-out and rule-in accuracy (NPV up to 0.91 and PPV up to 0.96). In practice, these findings could support earlier non-invasive identification of patients eligible for non-selective β-blocker therapy, more targeted use of HVPG in indeterminate cases, and harmonized risk stratification across elastography modalities, while recognizing that prospective validation and regulatory approval are required before routine clinical implementation.
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