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Genetic Diversity of the ACE2 Gene and Susceptibility to COVID-19 in Morocco Population
Nourdin Harich1, Hamid Farhane1, Soufiane Karchali1
1Laboratory of Anthropogenetics, Biotechnology and Health, Department of Biology, Faculty of Sciences, Chouaïb Doukkali University, El Jadida, Morocco.
Background:
The COVID-19 was the most amazing pandemic of the early third millennium, with significant variability in infection rates across regions worldwide. Genetic factors, particularly the ACE2 gene, coding for a common receptor implicated in facilitating SARS-CoV-2 entry into human cells, could play a crucial role in susceptibility to infection. Our study aimed to analyze the allelic frequency of four SNPs in ACE2 gene (rs4646127, rs2074192, rs2285666, rs112171234) and evaluate their correlations with COVID-19 infection rates in four regional samples from Morocco.
Methods:
The total sample (N = 200) was obtained from: Rif (n = 50), Doukkala (n = 50), Ouarzazate (n = 49), and, Guelmim (n = 51). Genomic DNA was extracted using the GeneJET™ kit and genotyped by real-time PCR using TaqMan technology.
Results:
Analyses revealed significant spatial variations in the frequencies of alternative alleles of the studied SNPs, ranging from 0% to 74%. A significant positive correlation was observed between the frequency of alternative G allele of the rs4646127 and the infection rate variation (r = 0.96; p = 0.03; n = 4). Furthermore, significant differences reached 54.17% with worldwide populations (from North Africa, sub-Saharan Africa, Europe, Latino-America, East Asia, and South Asia) for the total SNP's comparisons.
Conclusions:
Our results suggest a significant positive correlation between the frequency of the alternative allele of the ACE2 gene polymorphism rs4646127 and COVID-19 regional infection rates in Morocco. This property could be exploited to consider this SNP as a potential biomarker for identifying at-risk groups. However, due to the limited number of regional samples, our results for all the analyzed SNPs remain exploratory and would require confirmation through larger-scale studies.
Insights
Genetic variations in the ACE2 gene, specifically the rs4646127 polymorphism, show a significant link to COVID-19 infection rates in Moroccan regions. This finding suggests ACE2 gene variants could help identify populations at higher risk for COVID-19.
Area of Science:
- Genetics
- Epidemiology
- Infectious Diseases
Background:
- COVID-19 pandemic exhibited global infection rate variability.
- The Angiotensin-Converting Enzyme 2 (ACE2) gene is crucial for SARS-CoV-2 entry into human cells, influencing infection susceptibility.
- Genetic factors, including ACE2 gene polymorphisms, may play a significant role in differential COVID-19 susceptibility.
Purpose of the Study:
- To investigate the allelic frequencies of four Single Nucleotide Polymorphisms (SNPs) in the ACE2 gene (rs4646127, rs2074192, rs2285666, rs112171234).
- To evaluate the correlation between these ACE2 gene SNPs and COVID-19 infection rates across four distinct regions in Morocco.
Main Methods:
- Genomic DNA extraction from 200 participants across four Moroccan regions (Rif, Doukkala, Ouarzazate, Guelmim).
- Genotyping of ACE2 SNPs using real-time Polymerase Chain Reaction (PCR) with TaqMan technology.
- Statistical analysis to determine allelic frequencies and correlations with infection rates.
Main Results:
- Significant regional variations in alternative allele frequencies for the studied ACE2 SNPs were observed (0% to 74%).
- A strong positive correlation (r=0.96, p=0.03) was found between the rs4646127 G allele frequency and COVID-19 infection rate variations.
- Comparisons with global populations revealed significant differences (up to 54.17%) in SNP frequencies.
Conclusions:
- The rs4646127 polymorphism in the ACE2 gene is significantly correlated with regional COVID-19 infection rates in Morocco.
- This ACE2 SNP may serve as a potential biomarker for identifying individuals or groups at increased risk of COVID-19 infection.
- Further large-scale studies are warranted to confirm these exploratory findings due to the limited sample size.
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