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Published on: June 26, 2013
Classifying schizophrenia patients and healthy individuals: Whole brain SPECT functional connectivity using support
Amritha Harikumar1, Joanne Wardell1, David Keator2,3,4
1Tri-Institutional Center for Translational Research in Neuroimaging and Data Science (TReNDS), Georgia State, Georgia Tech, Emory, Atlanta, GA, USA.
This study shows that random forest and logistic regression classifiers are more effective than linear SVM for diagnosing schizophrenia using single photon emission computed tomography (SPECT) brain scans. These findings suggest improved diagnostic accuracy for functional brain networks in schizophrenia.
Area of Science:
- Neuroimaging
- Psychiatric Disorders
- Machine Learning
Background:
- Functional magnetic resonance imaging (fMRI) is widely used for brain network analysis in disorders like schizophrenia.
- Single photon emission computed tomography (SPECT) also measures neural activity via blood flow and tracers.
- Limited research exists on using SPECT data for individual subject classification in schizophrenia.
Purpose of the Study:
- To evaluate the accuracy of individual diagnostic prediction for schizophrenia using SPECT data.
- To compare the performance of various machine learning classifiers on SPECT-derived functional brain networks.
Main Methods:
- Utilized spatially constrained independent component analysis (sc-ICA) on SPECT data from 213 subjects (137 schizophrenia patients, 76 controls).
- Network priors were derived from fMRI data using the NeuroMark fMRI 1.0 template.
- Initially employed a support vector machine (SVM) classifier, followed by post hoc evaluation of random forest, logistic regression, voting, and multilayer perceptron.
Main Results:
- Linear SVM performed poorly, with more false negatives compared to other methods.
- Random forest achieved 88% sensitivity and 61% specificity.
- Logistic regression achieved 87% sensitivity and 68% specificity.
Conclusions:
- Random forest and logistic regression demonstrate superior performance for schizophrenia classification using SPECT data.
- These findings highlight the potential of sc-ICA combined with advanced classifiers for understanding aberrant functional networks in schizophrenia.
- Further investigation into these methods is recommended for future SPECT studies.
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