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Selecting Multiple Biomarker Subsets with Similarly Effective Binary Classification Performances
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Knowledge-Based Feature Selection Substantially Enhances Data-Driven Wastewater Treatment Modeling.

Senyuan Gu1,2, Shuting Wang3, Ruihong Qiu4

  • 1UNSW Water Research Centre, School of Civil and Environmental Engineering, The University of New South Wales, Sydney, New South Wales 2052, Australia.

Environmental Science & Technology
|July 12, 2026
PubMed
Summary

Integrating mechanistic insights with data improves wastewater treatment modeling. Knowledge-driven feature selection, using expert knowledge or large language models (LLMs), enhances predictive accuracy and model generalizability for nitrous oxide (N2O) emissions.

Keywords:
Feature selectiondata drivenexpert knowledgehigh-dimensionality datamachine learningwastewater modeling

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Area of Science:

  • Environmental Engineering
  • Wastewater Treatment
  • Data Science

Background:

  • Data-driven modeling in wastewater treatment faces challenges with small, high-dimensional datasets.
  • Abundant monitoring parameters can obscure fundamental mechanistic understanding.
  • Accurate prediction of nitrous oxide (N2O) emissions is crucial for environmental management.

Purpose of the Study:

  • To propose a knowledge-driven feature selection framework integrating mechanistic insights and statistical correlations.
  • To identify the most informative predictive features for wastewater treatment processes.
  • To enhance the accuracy and generalizability of predictive models for N2O emissions.

Main Methods:

  • A case study on N2O emission prediction at a full-scale wastewater treatment plant.
  • Comparison of deep-learning attention mechanisms with expert-guided and LLM-augmented feature selection.
  • Evaluation of model performance using R-squared and Mean Absolute Error (MAE) metrics.

Main Results:

  • Expert-guided feature selection achieved a mean R-squared of 0.723 and MAE of 0.033, outperforming attention-based models.
  • Knowledge-driven approaches significantly improved model generalizability, particularly under out-of-distribution conditions.
  • LLM-augmented feature selection demonstrated competitive accuracy (R-squared = 0.596, MAE = 0.041) and preserved generalizability.

Conclusions:

  • Integrating mechanistic understanding into feature selection is a powerful strategy for wastewater treatment modeling.
  • Knowledge-driven frameworks offer a generalizable pathway to address complex challenges in environmental data analysis.
  • This approach enhances predictive accuracy and model robustness while maintaining computational efficiency.